Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67603 | Canola | cytosol | 50.72 | 97.56 |
| CDY71540 | Canola | nucleus, plastid | 44.93 | 93.58 |
| Bra025590.1-P | Field mustard | cytosol | 18.66 | 72.54 |
| Bra011075.1-P | Field mustard | nucleus | 66.85 | 69.89 |
| Bra010348.1-P | Field mustard | nucleus | 70.65 | 67.94 |
| AT4G29000.1 | Thale cress | nucleus | 70.11 | 64.18 |
| Bra041042.1-P | Field mustard | nucleus | 53.8 | 59.05 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 48.19 | 50.76 |
| PGSC0003DMT400000824 | Potato | plastid | 42.93 | 48.57 |
| KRH39300 | Soybean | nucleus | 48.73 | 48.12 |
| KRH48373 | Soybean | nucleus | 48.37 | 47.51 |
| Solyc12g007180.1.1 | Tomato | nucleus | 42.39 | 46.99 |
| KRH41552 | Soybean | nucleus | 46.74 | 46.82 |
| Bra041164.1-P | Field mustard | nucleus | 8.33 | 46.46 |
| KRH60264 | Soybean | nucleus | 47.1 | 46.35 |
| Bra009859.1-P | Field mustard | nucleus | 32.25 | 34.97 |
| Bra036551.1-P | Field mustard | nucleus | 28.8 | 34.87 |
| Bra021165.1-P | Field mustard | nucleus | 17.03 | 28.83 |
| Bra023807.1-P | Field mustard | nucleus | 5.43 | 16.04 |
| Bra023810.1-P | Field mustard | nucleus, plastid | 16.12 | 15.03 |
| Bra036900.1-P | Field mustard | nucleus, plastid | 16.85 | 14.42 |
| Bra033920.1-P | Field mustard | plastid | 14.49 | 13.91 |
| Bra001128.1-P | Field mustard | nucleus | 12.68 | 13.44 |
| Bra033919.1-P | Field mustard | nucleus | 16.49 | 12.17 |
| Bra001884.1-P | Field mustard | nucleus, plastid | 17.75 | 8.01 |
Protein Annotations
| EnsemblPlants:Bra024171.1 | EnsemblPlants:Bra024171.1-P | EnsemblPlantsGene:Bra024171 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
| InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg |
| SMART:SM01114 | UniParc:UPI0002540CAC | UniProt:M4E5W7 | MapMan:15.5.9 | : | : |
Description
AT2G20110 (E=2e-145) | tesmin/TSO1-like CXC domain-containing protein
Coordinates
chrA03:+:27138351..27140638
Molecular Weight (calculated)
60410.3 Da
IEP (calculated)
8.615
GRAVY (calculated)
-0.770
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MFREEGGESL WKTKKKKKKK KLHKSAQRSH SENLDPYPPT EREVFQMGNA GGGGKLPPKN DGGFGAPARD PARQLDEHSR PKPAPTVVTS SLHPVAMSQS
101: QILNAPIRLS RQESPQSRPM PIVEGRDGTP QKKKHCNCKH SRCLKLYCEC FASGTYCDGC NCINCFNNVD NEPARRDAVE ATLERNPNAF RPKIAHGVRD
201: KREEMVLLGK HNKGCNCKKS GCLKKYCECF QANILCSENC KCLDCKNFDG SEERQALFHG EHANNMAYLQ QAGNAAITGA VGFSGFAPYP ASKRRKGGQD
301: ISFSHATKDT SSATGPSKFV YRSLLADVIH PQDVKALCSV LVAVAGEAAK TLLTDKRNEN RVGDHTETSL ASSAQENSQG DVEMAEPDGN QADKSRGKPL
401: SPATLALMCD DEEDTMFMIA ASEPNGSVDP GGCRTNSQGQ SQNYAELERV VLTKLRDCLS RLISYAEFKE SKCSYLARRH IQSPPAATDT VKMENGIQQV
501: PPIVNGASRA TSQPTVNKPQ LFQPMQTTTN TSSTHHPHKP PALPEKKDPL NQ
101: QILNAPIRLS RQESPQSRPM PIVEGRDGTP QKKKHCNCKH SRCLKLYCEC FASGTYCDGC NCINCFNNVD NEPARRDAVE ATLERNPNAF RPKIAHGVRD
201: KREEMVLLGK HNKGCNCKKS GCLKKYCECF QANILCSENC KCLDCKNFDG SEERQALFHG EHANNMAYLQ QAGNAAITGA VGFSGFAPYP ASKRRKGGQD
301: ISFSHATKDT SSATGPSKFV YRSLLADVIH PQDVKALCSV LVAVAGEAAK TLLTDKRNEN RVGDHTETSL ASSAQENSQG DVEMAEPDGN QADKSRGKPL
401: SPATLALMCD DEEDTMFMIA ASEPNGSVDP GGCRTNSQGQ SQNYAELERV VLTKLRDCLS RLISYAEFKE SKCSYLARRH IQSPPAATDT VKMENGIQQV
501: PPIVNGASRA TSQPTVNKPQ LFQPMQTTTN TSSTHHPHKP PALPEKKDPL NQ
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.