Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66476 | Canola | nucleus | 98.95 | 99.13 |
| Bra011075.1-P | Field mustard | nucleus | 71.08 | 77.27 |
| Bra025590.1-P | Field mustard | cytosol | 18.64 | 75.35 |
| Bra024171.1-P | Field mustard | nucleus | 67.94 | 70.65 |
| AT4G29000.1 | Thale cress | nucleus | 73.0 | 69.49 |
| Bra041042.1-P | Field mustard | nucleus | 56.45 | 64.41 |
| Bra041164.1-P | Field mustard | nucleus | 9.76 | 56.57 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 48.78 | 53.44 |
| KRH39300 | Soybean | nucleus | 50.52 | 51.88 |
| KRH48373 | Soybean | nucleus | 49.83 | 50.89 |
| PGSC0003DMT400000824 | Potato | plastid | 42.68 | 50.2 |
| KRH41552 | Soybean | nucleus | 47.91 | 49.91 |
| KRH60264 | Soybean | nucleus | 48.26 | 49.38 |
| Solyc12g007180.1.1 | Tomato | nucleus | 42.68 | 49.2 |
| Bra009859.1-P | Field mustard | nucleus | 32.58 | 36.74 |
| Bra036551.1-P | Field mustard | nucleus | 28.22 | 35.53 |
| Bra021165.1-P | Field mustard | nucleus | 17.07 | 30.06 |
| Bra023807.1-P | Field mustard | nucleus | 6.1 | 18.72 |
| Bra023810.1-P | Field mustard | nucleus, plastid | 17.25 | 16.72 |
| Bra036900.1-P | Field mustard | nucleus, plastid | 17.6 | 15.66 |
| Bra033920.1-P | Field mustard | plastid | 15.16 | 15.13 |
| Bra001128.1-P | Field mustard | nucleus | 13.41 | 14.78 |
| Bra033919.1-P | Field mustard | nucleus | 17.42 | 13.37 |
| Bra001884.1-P | Field mustard | nucleus, plastid | 17.6 | 8.26 |
Protein Annotations
| EnsemblPlants:Bra010348.1 | EnsemblPlants:Bra010348.1-P | EnsemblPlantsGene:Bra010348 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
| InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg |
| SMART:SM01114 | UniParc:UPI00025472BE | UniProt:M4D1J8 | MapMan:15.5.9 | : | : |
Description
AT2G20110 (E=3e-151) | tesmin/TSO1-like CXC domain-containing protein
Coordinates
chrA08:-:14017283..14019905
Molecular Weight (calculated)
61448.6 Da
IEP (calculated)
7.742
GRAVY (calculated)
-0.664
Length
574 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGGGGGGG GGDFPPKKDG VSDESCFQAK KEATQLDFTG GSDEHYSESH TVVPPSVTPP VTTTPSRLHP VARPALPVVT SQSQSQSQIL NAPISLPKPP
101: ESPESRARPP IVEGRDGTPQ KKKHCNCKLS RCLKLYCECF AAGTYCDGCN CLNCFNNVDN EPARRDAVEA TLDRNPNAFR PKIASSPHGV RDKKEEIVLL
201: GKHNKGCHCK KSGCLKKYCE CFQANVLCSE NCRCLGCKNF EGSEERQALF HGEHANNMAY LQQAANAAIT GAVGSSGFAP FPAPKRRKGQ DISFNQATND
301: SSMHRLGQFQ QASNGRTSGP TSTTSPANVS RAGGNSSAPS KFVYRSLLAE IIQPQDVKAL CSVLVAVAGE TTKTLTDRRN ETEKRVEDQT ETSLASYNSQ
401: GNKTDGSQAD GSKGDPLSPA TLALMCDEQD SLFMVAAAEP NGSVDPGGCG TNSQGQSEIY AEKERVVLTK FRDCLTRLIS YADFKESKCS YLARSHIQSP
501: STVPTVTVKT ENGIQQRPPV VNGASLTTTQ PALNKPQLVQ PTTTTDTSSS HHPHKPPALE ENKDTSESNK VYST
101: ESPESRARPP IVEGRDGTPQ KKKHCNCKLS RCLKLYCECF AAGTYCDGCN CLNCFNNVDN EPARRDAVEA TLDRNPNAFR PKIASSPHGV RDKKEEIVLL
201: GKHNKGCHCK KSGCLKKYCE CFQANVLCSE NCRCLGCKNF EGSEERQALF HGEHANNMAY LQQAANAAIT GAVGSSGFAP FPAPKRRKGQ DISFNQATND
301: SSMHRLGQFQ QASNGRTSGP TSTTSPANVS RAGGNSSAPS KFVYRSLLAE IIQPQDVKAL CSVLVAVAGE TTKTLTDRRN ETEKRVEDQT ETSLASYNSQ
401: GNKTDGSQAD GSKGDPLSPA TLALMCDEQD SLFMVAAAEP NGSVDPGGCG TNSQGQSEIY AEKERVVLTK FRDCLTRLIS YADFKESKCS YLARSHIQSP
501: STVPTVTVKT ENGIQQRPPV VNGASLTTTQ PALNKPQLVQ PTTTTDTSSS HHPHKPPALE ENKDTSESNK VYST
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.