Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG33424 | Sorghum | nucleus | 87.07 | 86.79 |
Zm00001d012688_P001 | Maize | nucleus | 86.74 | 86.32 |
Os01t0761100-01 | Rice | cytosol, nucleus, plastid | 72.34 | 71.41 |
TraesCS3D01G297000.1 | Wheat | plastid | 69.23 | 68.78 |
TraesCS3A01G304800.1 | Wheat | plastid | 69.23 | 68.78 |
TraesCS3B01G331700.1 | Wheat | plastid | 68.9 | 68.46 |
HORVU3Hr1G073470.1 | Barley | cytosol, nucleus, plastid | 68.25 | 68.14 |
Bra025590.1-P | Field mustard | cytosol | 13.91 | 59.86 |
CDY44573 | Canola | cytosol | 13.91 | 59.86 |
GSMUA_Achr9P06330_001 | Banana | cytosol | 41.41 | 50.0 |
GSMUA_Achr2P09150_001 | Banana | cytosol | 41.41 | 48.47 |
GSMUA_Achr6P26760_001 | Banana | nucleus | 43.04 | 47.22 |
PGSC0003DMT400000824 | Potato | plastid | 36.66 | 45.9 |
Solyc12g007180.1.1 | Tomato | nucleus | 36.01 | 44.18 |
VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 37.64 | 43.89 |
KRH48373 | Soybean | nucleus | 39.77 | 43.24 |
KRH41552 | Soybean | nucleus | 38.95 | 43.19 |
KRH39300 | Soybean | nucleus | 39.44 | 43.11 |
KRH60264 | Soybean | nucleus | 38.79 | 42.25 |
GSMUA_Achr3P31550_001 | Banana | nucleus | 40.43 | 42.22 |
AT4G29000.1 | Thale cress | nucleus | 39.28 | 39.8 |
AT2G20110.2 | Thale cress | nucleus | 36.82 | 38.93 |
Zm00001d037461_P001 | Maize | cytosol | 29.79 | 35.62 |
Zm00001d015990_P001 | Maize | nucleus | 28.15 | 32.45 |
Zm00001d038660_P003 | Maize | nucleus | 9.98 | 16.94 |
Zm00001d031008_P001 | Maize | nucleus | 10.64 | 16.5 |
Zm00001d041444_P002 | Maize | nucleus | 10.64 | 16.5 |
Zm00001d033274_P005 | Maize | nucleus | 15.22 | 12.67 |
Zm00001d010713_P006 | Maize | cytosol | 7.04 | 11.78 |
Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 14.89 | 10.89 |
Zm00001d031009_P004 | Maize | golgi, plasma membrane | 14.73 | 10.82 |
Zm00001d018930_P003 | Maize | nucleus | 14.57 | 10.77 |
Protein Annotations
EnsemblPlants:Zm00001d043378_P001 | EnsemblPlants:Zm00001d043378_T001 | EnsemblPlantsGene:Zm00001d043378 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam |
InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:ONM37715.1 |
SEG:seg | SMART:SM01114 | UniParc:UPI000844BFDD | UniProt:A0A1D6NAZ9 | MapMan:15.5.9 | : |
Description
CPP-transcription factor 11Protein tesmin/TSO1-like CXC 5
Coordinates
chr3:+:198206233..198229237
Molecular Weight (calculated)
66962.6 Da
IEP (calculated)
8.172
GRAVY (calculated)
-0.634
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGNEQGCGG LPQRPPVLGA SMQPPIKKLV RQLDFNSAAL AGNPAMAVAA AAVSRVLQPK ASSVGFQHPQ HVGAAMPMGV PQQLHQRVLP VMRLHQVVGH
101: VPLAVSVPQL RPVPPQPVQR PPVAVPLKPE SPKLRARLYE GKDSTPTKKK CCNCRNSKCL KLYCECFASG TYCDGCNCTN CFNNPDNEVA RREAVEAILD
201: RNPDAFRPKI GSSPHMHRNN VSSVEVPSDL PLVGKHNKGC HCKKSGCLKK YCECFQANIL CSENCKCMDC KNFEGSEERR NLFQGDHKNA INMQQVTNAA
301: VNGAIGATGF PSPSTSRKRK HNDPSLDHFN KEHIAHKNYH IPQKNAVPDG SIPISQSAHP PTLGPFTYKP LLADTVQAED IKELCKLLVV VSGEAAKTYA
401: GQKTKEERVG EKEDEIGGQK EDDRVGSLAL TNHDREGNNQ DQDQKAPIDD HSSRGTHTGK AIIEESRPNC VDDHKTHRPM SPGTLALMCD EEAFEKMCDE
501: QDTMFTTSQN AAPQQTVIVN HNQSALYAEQ ENVVLTEFRD CLRKFVRYGR MKEERYSMAI KSETSGHPGQ VNGVSQVPYS KVDVPAVKTY PQSSSSHLVA
601: GKPVTGLLDK N
101: VPLAVSVPQL RPVPPQPVQR PPVAVPLKPE SPKLRARLYE GKDSTPTKKK CCNCRNSKCL KLYCECFASG TYCDGCNCTN CFNNPDNEVA RREAVEAILD
201: RNPDAFRPKI GSSPHMHRNN VSSVEVPSDL PLVGKHNKGC HCKKSGCLKK YCECFQANIL CSENCKCMDC KNFEGSEERR NLFQGDHKNA INMQQVTNAA
301: VNGAIGATGF PSPSTSRKRK HNDPSLDHFN KEHIAHKNYH IPQKNAVPDG SIPISQSAHP PTLGPFTYKP LLADTVQAED IKELCKLLVV VSGEAAKTYA
401: GQKTKEERVG EKEDEIGGQK EDDRVGSLAL TNHDREGNNQ DQDQKAPIDD HSSRGTHTGK AIIEESRPNC VDDHKTHRPM SPGTLALMCD EEAFEKMCDE
501: QDTMFTTSQN AAPQQTVIVN HNQSALYAEQ ENVVLTEFRD CLRKFVRYGR MKEERYSMAI KSETSGHPGQ VNGVSQVPYS KVDVPAVKTY PQSSSSHLVA
601: GKPVTGLLDK N
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.