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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG33424 Sorghum nucleus 87.07 86.79
Zm00001d012688_P001 Maize nucleus 86.74 86.32
Os01t0761100-01 Rice cytosol, nucleus, plastid 72.34 71.41
TraesCS3D01G297000.1 Wheat plastid 69.23 68.78
TraesCS3A01G304800.1 Wheat plastid 69.23 68.78
TraesCS3B01G331700.1 Wheat plastid 68.9 68.46
HORVU3Hr1G073470.1 Barley cytosol, nucleus, plastid 68.25 68.14
Bra025590.1-P Field mustard cytosol 13.91 59.86
CDY44573 Canola cytosol 13.91 59.86
GSMUA_Achr9P06330_001 Banana cytosol 41.41 50.0
GSMUA_Achr2P09150_001 Banana cytosol 41.41 48.47
GSMUA_Achr6P26760_001 Banana nucleus 43.04 47.22
PGSC0003DMT400000824 Potato plastid 36.66 45.9
Solyc12g007180.1.1 Tomato nucleus 36.01 44.18
VIT_11s0016g03680.t01 Wine grape nucleus, plastid 37.64 43.89
KRH48373 Soybean nucleus 39.77 43.24
KRH41552 Soybean nucleus 38.95 43.19
KRH39300 Soybean nucleus 39.44 43.11
KRH60264 Soybean nucleus 38.79 42.25
GSMUA_Achr3P31550_001 Banana nucleus 40.43 42.22
AT4G29000.1 Thale cress nucleus 39.28 39.8
AT2G20110.2 Thale cress nucleus 36.82 38.93
Zm00001d037461_P001 Maize cytosol 29.79 35.62
Zm00001d015990_P001 Maize nucleus 28.15 32.45
Zm00001d038660_P003 Maize nucleus 9.98 16.94
Zm00001d031008_P001 Maize nucleus 10.64 16.5
Zm00001d041444_P002 Maize nucleus 10.64 16.5
Zm00001d033274_P005 Maize nucleus 15.22 12.67
Zm00001d010713_P006 Maize cytosol 7.04 11.78
Zm00001d041445_P007 Maize golgi, nucleus, plasma membrane 14.89 10.89
Zm00001d031009_P004 Maize golgi, plasma membrane 14.73 10.82
Zm00001d018930_P003 Maize nucleus 14.57 10.77
Protein Annotations
EnsemblPlants:Zm00001d043378_P001EnsemblPlants:Zm00001d043378_T001EnsemblPlantsGene:Zm00001d043378InterPro:CRCInterPro:IPR005172InterPro:Lin-54_fam
InterPro:Tesmin/TSO1-like_CXCPANTHER:PTHR12446PANTHER:PTHR12446:SF14PFAM:PF03638PFscan:PS51634ProteinID:ONM37715.1
SEG:segSMART:SM01114UniParc:UPI000844BFDDUniProt:A0A1D6NAZ9MapMan:15.5.9:
Description
CPP-transcription factor 11Protein tesmin/TSO1-like CXC 5
Coordinates
chr3:+:198206233..198229237
Molecular Weight (calculated)
66962.6 Da
IEP (calculated)
8.172
GRAVY (calculated)
-0.634
Length
611 amino acids
Sequence
(BLAST)
001: MEGNEQGCGG LPQRPPVLGA SMQPPIKKLV RQLDFNSAAL AGNPAMAVAA AAVSRVLQPK ASSVGFQHPQ HVGAAMPMGV PQQLHQRVLP VMRLHQVVGH
101: VPLAVSVPQL RPVPPQPVQR PPVAVPLKPE SPKLRARLYE GKDSTPTKKK CCNCRNSKCL KLYCECFASG TYCDGCNCTN CFNNPDNEVA RREAVEAILD
201: RNPDAFRPKI GSSPHMHRNN VSSVEVPSDL PLVGKHNKGC HCKKSGCLKK YCECFQANIL CSENCKCMDC KNFEGSEERR NLFQGDHKNA INMQQVTNAA
301: VNGAIGATGF PSPSTSRKRK HNDPSLDHFN KEHIAHKNYH IPQKNAVPDG SIPISQSAHP PTLGPFTYKP LLADTVQAED IKELCKLLVV VSGEAAKTYA
401: GQKTKEERVG EKEDEIGGQK EDDRVGSLAL TNHDREGNNQ DQDQKAPIDD HSSRGTHTGK AIIEESRPNC VDDHKTHRPM SPGTLALMCD EEAFEKMCDE
501: QDTMFTTSQN AAPQQTVIVN HNQSALYAEQ ENVVLTEFRD CLRKFVRYGR MKEERYSMAI KSETSGHPGQ VNGVSQVPYS KVDVPAVKTY PQSSSSHLVA
601: GKPVTGLLDK N
Best Arabidopsis Sequence Match ( AT4G29000.1 )
(BLAST)
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.