Factsheet for Zm00001d041445_P007

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, nucleus

Predictor Summary:

golgi 1
mitochondrion 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus, plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17353	Sorghum	nucleus	83.49	91.0
Zm00001d031009_P004	Maize	golgi, plasma membrane	83.97	84.38
TraesCS5A01G053800.1	Wheat	nucleus	62.08	67.84
TraesCS5D01G065300.1	Wheat	nucleus	61.96	67.71
TraesCS5B01G062400.1	Wheat	nucleus	61.84	67.58
Os12t0605500-01	Rice	nucleus	61.24	67.37
HORVU5Hr1G012950.1	Barley	nucleus	61.24	66.84
CDY34235	Canola	endoplasmic reticulum, extracellular, vacuole	15.07	44.06
Zm00001d033274_P005	Maize	nucleus	33.49	38.15
CDY54822	Canola	cytosol, plastid	24.52	37.34
CDY67857	Canola	nucleus, plastid	26.79	37.09
GSMUA_Achr9P10600_001	Banana	nucleus	32.54	36.86
Bra023810.1-P	Field mustard	nucleus, plastid	25.96	36.66
CDY64240	Canola	cytosol, plastid	26.08	36.58
CDY10668	Canola	nucleus, plastid	24.88	36.24
CDY29770	Canola	nucleus, plastid	27.63	35.7
Bra036900.1-P	Field mustard	nucleus, plastid	27.51	35.66
CDY64242	Canola	nucleus	11.24	35.61
Bra033920.1-P	Field mustard	plastid	24.16	35.13
GSMUA_Achr8P20460_001	Banana	nucleus	33.61	34.91
AT4G14770.1	Thale cress	nucleus	27.99	34.72
VIT_05s0020g03880.t01	Wine grape	nucleus	31.58	34.6
CDY42785	Canola	nucleus, plastid	27.15	34.55
GSMUA_Achr9P25670_001	Banana	nucleus	33.97	34.26
AT3G22760.1	Thale cress	nucleus	24.76	33.99
KRH77830	Soybean	nucleus	30.74	33.2
KRH35487	Soybean	nucleus	30.02	33.03
KRG91344	Soybean	nucleus	30.5	32.95
KRH27657	Soybean	nucleus	30.5	32.95
CDY54821	Canola	nucleus	26.2	32.25
Zm00001d018930_P003	Maize	nucleus	31.82	32.2
AT3G22780.1	Thale cress	nucleus	25.84	31.08
VIT_14s0030g01800.t01	Wine grape	nucleus	29.31	30.4
Bra033919.1-P	Field mustard	nucleus	25.96	29.01
Solyc09g082500.2.1	Tomato	nucleus	28.59	28.83
CDY10669	Canola	nucleus	25.72	28.74
PGSC0003DMT400082098	Potato	nucleus	28.35	28.69
Zm00001d038660_P003	Maize	nucleus	11.48	26.67
Zm00001d031008_P001	Maize	nucleus	12.08	25.63
Zm00001d041444_P002	Maize	nucleus	11.72	24.87
Zm00001d010713_P006	Maize	cytosol	8.85	20.27
CDX94892	Canola	nucleus, plastid	26.44	17.81
CDX92957	Canola	nucleus, plastid	25.84	17.76
Bra001884.1-P	Field mustard	nucleus, plastid	25.84	17.66
Zm00001d037461_P001	Maize	cytosol	9.93	16.24
Zm00001d043378_P001	Maize	nucleus	10.89	14.89
Zm00001d015990_P001	Maize	nucleus	9.33	14.72
Zm00001d012688_P001	Maize	nucleus	10.77	14.66

Protein Annotations

EnsemblPlants:Zm00001d041445_P007	EnsemblPlants:Zm00001d041445_T007	EnsemblPlantsGene:Zm00001d041445	EntrezGene:100216775	InterPro:CRC	InterPro:IPR005172
InterPro:Lin-54_fam	InterPro:Tesmin/TSO1-like_CXC	PANTHER:PTHR12446	PANTHER:PTHR12446:SF21	PFAM:PF03638	PFscan:PS51634
ProteinID:ONM33056.1	ProteinID:ONM33061.1	ProteinID:ONM33063.1	SEG:seg	SMART:SM01114	UniParc:UPI000844E129
UniProt:A0A1D6MW79	MapMan:15.5.9	:	:	:	:

Description

CPP-transcription factor 10Protein tesmin/TSO1-like CXC 2

Coordinates

chr3:-:120191179..120204285

Molecular Weight (calculated)

90054.5 Da

IEP (calculated)

7.366

GRAVY (calculated)

-0.515

Length

836 amino acids

Sequence
(BLAST)

001: MDTPDRPRAG AGAGFEERGR GSVPFVLGLD WSVAIQLIIL GLSMRLGVPC KIAFQSVETL SYVTCHHDSG IDKAFVIDKL DSPVFNFINN LSPIPPPKPL
101: DSAHNVQLFK SSDLAPVSSI FASPHVNPTK GTKVLIRDES VQLPHELHSP SSVRTRIGTS GSFRMIRCKD IVPENCNITC QLNEASIDSS DHTSSSTGQL
201: TQSIKDAAGS MESDKDQCAG GKIDLTMSQE CTGLEGMNLD ESSPDRMDSS HSGIVVHENQ LSEQNNDEPA AYNGVYMITH QSSSDMLTLA VPSGTEAQPM
301: NDTQKADNPY PCESLLDVQS SGNCTQNSVH EPHLYWNGAV EGAAVAYTPQ ALPGALQSQL MPCNKLNEPK DYMPTEQNAL SQHLRGMRRR SLFNEKAGLS
401: NKGVDKASDH HPVNSTTPKC KTISGDNSKT LRTPPCALPG IGLHLNALAA TATPKEKIVP QDIQSTINES SNLIGPAGSS PAPSEQNIIN DDFTQTTDVA
501: TAEASSQGSP KKKRHKFDSG DGTSCKRCSC KKSKCLKLYC ECFAAGVYCS EPCSCIGCMN NQSHTETVLS TRQQIESRNP LAFAPKVIHT SEPGLELRDF
601: SNKTPASARH KRGCNCKKSS CLKKYCECFQ GGVGCSISCR CEGCKNAFGK REGAAVLSIE EPKQGLEEKD VCVKEEKSEI EKQLVVYQTP DDAPAENVLT
701: TPSMVQCRPL ACRPPPSSKK SSKKPRSSTK LTGHPSRLCN LQAPPKTDTM LSPFENYAEM VLGDSTSDIL KGNSSPQTSV KVVSPNKKRI SPLRMGTGLS
801: PICRSGRKLI LKSIPSFPSL GGDVNNEDPE TKLPAP

Best Arabidopsis Sequence Match ( AT3G22760.2 )
(BLAST)

001: MMDNVKKKSD TPDWETLIAA TTELIYGSPR ESEAFSCLLK KTSNSEARLR GSITATSVAV TNTDVVNNES ESVDALSILH RGVRRRCLDF EVKGNNQQTL
101: GESSSSCVVP SIGLHLNTIA MSSKDKNVAN EYSFSGNIKV GVQSSLTPVL HSQHDIVREN ESGKDSGQII EVVPKSLASV DLTPISPKKK RRKSEQSGEG
201: DSSCKRCNCK KSKCLKLYCE CFAAGFYCIE PCSCINCFNK PIHKDVVLAT RKQIESRNPL AFAPKVIRNS DSIIEVGEDA SKTPASARHK RGCNCKKSNC
301: LKKYCECYQG GVGCSINCRC EGCKNAFGRK DGSLFEQDEE NETSGTPGTK KTQQNVELFK PAAPPSTPIP FRQPLAQLPI SSNNRLLPPQ SHFHHGAIGS
401: SSSGIYNIRK PDMSLLSHSR IETITEDIDD MSENLIHSPI TTLSPNSKRV SLSHLDSPES TPWRRNGGGR NLIRSFPTFP SLTPHH

Arabidopsis Description

TCX3Protein tesmin/TSO1-like CXC 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.