Factsheet for Zm00001d012688_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33424	Sorghum	nucleus	91.04	91.19
Zm00001d043378_P001	Maize	nucleus	86.32	86.74
Os01t0761100-01	Rice	cytosol, nucleus, plastid	75.73	75.12
TraesCS3D01G297000.1	Wheat	plastid	71.99	71.87
TraesCS3A01G304800.1	Wheat	plastid	71.99	71.87
TraesCS3B01G331700.1	Wheat	plastid	71.66	71.54
HORVU3Hr1G073470.1	Barley	cytosol, nucleus, plastid	70.85	71.08
Bra025590.1-P	Field mustard	cytosol	13.84	59.86
CDY44573	Canola	cytosol	13.84	59.86
GSMUA_Achr9P06330_001	Banana	cytosol	41.69	50.59
GSMUA_Achr2P09150_001	Banana	cytosol	43.0	50.57
PGSC0003DMT400000824	Potato	plastid	38.27	48.16
GSMUA_Achr6P26760_001	Banana	nucleus	43.49	47.94
Solyc12g007180.1.1	Tomato	nucleus	37.3	45.98
VIT_11s0016g03680.t01	Wine grape	nucleus, plastid	38.93	45.61
KRH48373	Soybean	nucleus	40.72	44.48
KRH41552	Soybean	nucleus	39.9	44.46
KRH39300	Soybean	nucleus	40.07	44.01
KRH60264	Soybean	nucleus	39.74	43.49
GSMUA_Achr3P31550_001	Banana	nucleus	41.04	43.08
AT4G29000.1	Thale cress	nucleus	40.07	40.8
AT2G20110.2	Thale cress	nucleus	37.62	39.97
Zm00001d037461_P001	Maize	cytosol	29.97	36.01
Zm00001d015990_P001	Maize	nucleus	28.5	33.02
Zm00001d041444_P002	Maize	nucleus	11.4	17.77
Zm00001d031008_P001	Maize	nucleus	11.24	17.51
Zm00001d038660_P003	Maize	nucleus	10.1	17.22
Zm00001d033274_P005	Maize	nucleus	14.82	12.4
Zm00001d010713_P006	Maize	cytosol	7.17	12.05
Zm00001d031009_P004	Maize	golgi, plasma membrane	14.66	10.82
Zm00001d018930_P003	Maize	nucleus	14.5	10.77
Zm00001d041445_P007	Maize	golgi, nucleus, plasma membrane	14.66	10.77

Protein Annotations

EnsemblPlants:Zm00001d012688_P001	EnsemblPlants:Zm00001d012688_T001	EnsemblPlantsGene:Zm00001d012688	EntrezGene:103636625	InterPro:CRC	InterPro:IPR005172
InterPro:Lin-54_fam	InterPro:Tesmin/TSO1-like_CXC	ncoils:Coil	PANTHER:PTHR12446	PANTHER:PTHR12446:SF14	PFAM:PF03638
PFscan:PS51634	ProteinID:AQL00296.1	SEG:seg	SMART:SM01114	UniParc:UPI0004DE9AA6	UniProt:A0A1D6GB29
MapMan:15.5.9	:	:	:	:	:

Description

CPP-transcription factor 7Protein tesmin/TSO1-like CXC 5

Coordinates

chr8:+:178683463..178701014

Molecular Weight (calculated)

67189.7 Da

IEP (calculated)

8.550

GRAVY (calculated)

-0.739

Length

614 amino acids

Sequence
(BLAST)

001: MAGKEQGGGG PPQRPPMPAA SMQPPIKKLV RQLDFNSAAL AGNPAMAAAA AAVSRALQPR ALPAGFQHPQ HVRAAVPMVV PQQLHQRALP VMRPHPVVGH
101: VPRHAVPLAV PVPQLRPMPP QPVQRPPVAV PLKPDSPKPW ARLYEGKDST PTKKKCCNCR NSRCLKLYCE CFASGTHCDG CNCTNCFNNP ENEVARREAI
201: EATLERNPDA FRPKIGSSPH TNRNNEVSSD LPLVGKHNKG CHCKKSGCLK KYCECFQANI LCSENCKCMD CKNFEGSEER RNLFQGDHKN AINIQQATNA
301: AVNGAIGTTG FPSPSTSRKR KHIDPSLDHS NKEHAAHRNC HIPQKNAVPD GSIPISQSAH PPTLGPFKVT YRPLLADIVQ AEDVKELCKL LVVVSGEAAK
401: TYADRKAKEE RVGKKEDERA EQKEDDRAGS LALTNHDREG NNQDPDKKAS IDDHSSRGTH TGKANQEESR PNCADDQKSN RPMSPGTLAL MCDEQAFEKM
501: CDEQDTVFTA SQNAVPQQTV TVNQNQSALY AEQERIVLTE FRDCLRKLVT YGRMKEERYA MEIKSETSGH PGQVNGVSQV PYSKVEVPVV KTDPQSSSSH
601: PVAGKPVTGL LDKN

Best Arabidopsis Sequence Match ( AT4G29000.1 )
(BLAST)

001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP

Arabidopsis Description

TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.