Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30022 | Sorghum | nucleus, plastid | 84.72 | 82.69 |
| Os02t0274600-00 | Rice | cytosol, nucleus | 43.21 | 52.4 |
| Zm00001d037461_P001 | Maize | cytosol | 45.66 | 47.36 |
| CDY19795 | Canola | nucleus | 24.91 | 29.01 |
| Bra036551.1-P | Field mustard | nucleus | 24.91 | 28.95 |
| CDY65712 | Canola | nucleus | 24.72 | 28.6 |
| Zm00001d012688_P001 | Maize | nucleus | 33.02 | 28.5 |
| Zm00001d043378_P001 | Maize | nucleus | 32.45 | 28.15 |
| Bra009859.1-P | Field mustard | nucleus | 26.42 | 27.5 |
| CDX88196 | Canola | nucleus | 26.23 | 27.25 |
| AT5G25790.2 | Thale cress | nucleus | 25.66 | 26.98 |
| CDX80536 | Canola | nucleus | 26.42 | 26.98 |
| CDY05340 | Canola | nucleus | 24.15 | 26.78 |
| CDY28377 | Canola | nucleus | 15.09 | 24.39 |
| Bra021165.1-P | Field mustard | nucleus | 14.34 | 23.31 |
| CDY20184 | Canola | cytosol | 14.91 | 23.24 |
| AT3G16160.1 | Thale cress | nucleus | 16.04 | 23.1 |
| Zm00001d038660_P003 | Maize | nucleus | 11.32 | 16.67 |
| Zm00001d031008_P001 | Maize | nucleus | 12.26 | 16.5 |
| Zm00001d041444_P002 | Maize | nucleus | 12.08 | 16.24 |
| Zm00001d033274_P005 | Maize | nucleus | 14.72 | 10.63 |
| Zm00001d018930_P003 | Maize | nucleus | 16.23 | 10.41 |
| Zm00001d010713_P006 | Maize | cytosol | 7.17 | 10.41 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 14.72 | 9.33 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 14.53 | 9.25 |
Protein Annotations
| EMBL:BT060902 | EMBL:KJ727998 | EnsemblPlants:Zm00001d015990_P001 | EnsemblPlants:Zm00001d015990_T001 | EnsemblPlantsGene:Zm00001d015990 | EntrezGene:100304343 |
| InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF35 |
| PFAM:PF03638 | PFscan:PS51634 | ProteinID:AQK69871.1 | SEG:seg | SMART:SM01114 | UniParc:UPI00019488D5 |
| UniProt:C0HEZ6 | MapMan:15.5.9 | : | : | : | : |
Description
CPP-transcription factor 9Protein tesmin/TSO1-like CXC 5
Coordinates
chr5:+:137506224..137522034
Molecular Weight (calculated)
57881.3 Da
IEP (calculated)
6.493
GRAVY (calculated)
-0.774
Length
530 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQGRNQQHP QQLSSPPVLA AASEIKAPAV PSQQPKPAAP VMSVPRQWPI AFNPLKSSTE EKSVTPKKKK HCNCRNSKCL KMYCECFQEL QYCDGCNCSN
101: CGNIVGNENA RNEAIEAIRQ RNPSAFQPKI GNDSNTLNVR KDNSGAVPLV AKHHKGCHCK KSGCLKKYCE CYQANVFCSK NCRCMHCKNS EGNKDTETSI
201: QRDHASDRNH IEQAANIAFN GSVGSSGYIC SLSRKRSHED TQCVRINSEG SMPETQYQQG NHADVSMLPP CSTGFDGHNA ANTKPYNPNY RSPLANTIHL
301: SEVNDLVKQL VMVCRMAAAT IADDETDLIA EEKGSQSNNG LSNGNCKQQD FKEASSMVIL SEGCSDQPNI DETGSHRSKT LDFSRPASPT TQALMCDEQD
401: ATFGNEPASP TTQALMCEEQ NTTFGNDYRS SFPLVSCDQD ISEINAAQEN LVLTGLREYL RVIITRGKIN EHKSSLEAAM ELDAQQHHGA PPALSATEDE
501: EKSPPSSTIE TPRTNQQPTP NGGSKDSIGS
101: CGNIVGNENA RNEAIEAIRQ RNPSAFQPKI GNDSNTLNVR KDNSGAVPLV AKHHKGCHCK KSGCLKKYCE CYQANVFCSK NCRCMHCKNS EGNKDTETSI
201: QRDHASDRNH IEQAANIAFN GSVGSSGYIC SLSRKRSHED TQCVRINSEG SMPETQYQQG NHADVSMLPP CSTGFDGHNA ANTKPYNPNY RSPLANTIHL
301: SEVNDLVKQL VMVCRMAAAT IADDETDLIA EEKGSQSNNG LSNGNCKQQD FKEASSMVIL SEGCSDQPNI DETGSHRSKT LDFSRPASPT TQALMCDEQD
401: ATFGNEPASP TTQALMCEEQ NTTFGNDYRS SFPLVSCDQD ISEINAAQEN LVLTGLREYL RVIITRGKIN EHKSSLEAAM ELDAQQHHGA PPALSATEDE
501: EKSPPSSTIE TPRTNQQPTP NGGSKDSIGS
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.