Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19781 | Sorghum | cytosol | 79.73 | 81.06 |
| Zm00001d038660_P003 | Maize | nucleus | 78.63 | 79.72 |
| Os05t0509400-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 69.32 | 67.65 |
| TraesCS1A01G327100.1 | Wheat | plastid | 68.49 | 67.2 |
| TraesCS1D01G329200.1 | Wheat | plastid | 68.49 | 66.84 |
| TraesCS1B01G340500.1 | Wheat | cytosol, plastid | 68.22 | 66.58 |
| HORVU1Hr1G078000.1 | Barley | plastid | 68.22 | 60.29 |
| Zm00001d031008_P001 | Maize | nucleus | 32.88 | 30.46 |
| Zm00001d041444_P002 | Maize | nucleus | 30.96 | 28.68 |
| CDX79489 | Canola | cytosol | 11.23 | 12.69 |
| Zm00001d033274_P005 | Maize | nucleus | 19.45 | 9.67 |
| Zm00001d018930_P003 | Maize | nucleus | 21.1 | 9.32 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 20.27 | 8.85 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 19.73 | 8.65 |
| Bra001128.1-P | Field mustard | nucleus | 12.33 | 8.64 |
| CDX74164 | Canola | nucleus | 12.33 | 8.62 |
| AT3G04850.1 | Thale cress | cytosol | 14.52 | 8.29 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 12.05 | 8.1 |
| Zm00001d037461_P001 | Maize | cytosol | 10.96 | 7.83 |
| Zm00001d015990_P001 | Maize | nucleus | 10.41 | 7.17 |
| Zm00001d012688_P001 | Maize | nucleus | 12.05 | 7.17 |
| Zm00001d043378_P001 | Maize | nucleus | 11.78 | 7.04 |
Protein Annotations
| EnsemblPlants:Zm00001d010713_P006 | EnsemblPlants:Zm00001d010713_T006 | EnsemblPlantsGene:Zm00001d010713 | EntrezGene:100282378 | InterPro:CRC | InterPro:IPR005172 |
| InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF44 | PFAM:PF03638 | PFscan:PS51634 |
| ProteinID:AQK94656.1 | ProteinID:AQK94658.1 | SMART:SM01114 | UniParc:UPI000844AE58 | UniProt:A0A1D6FSX2 | MapMan:15.5.9 |
Description
CPP-transcription factor 8Protein tesmin/TSO1-like CXC 4
Coordinates
chr8:+:125353059..125356918
Molecular Weight (calculated)
41251.0 Da
IEP (calculated)
8.662
GRAVY (calculated)
-0.684
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MEATPISMKP PAPPPVTLEP IELSTHAVGL TELERSSMNQ LAIAPDPKRQ RVEEAADGNG CKHCACKKSR CLKLYCPCFA GGGYCSDKCG CQPCFNKEAF
101: SETVQTTRKV LLSRQKRMSM KINRRPEANA EPMEDAHHSS SSTPPRRGET RLPNSLLWTG WDRMFLVLPL RRLPEPFREK WYLRNTFIDS SKNYTNGIIA
201: DDSKRYLYTG ADLDHSEGEH DFVVERSPRL QSPMSKESSF HQTPPHLRAS SRDAHVFPQA VSQWQALPRS WHCSNKRNGN DRAMDDSSAN GNYKSSSHDW
301: QMSKLEDGYS ISRCVQILNG MVELSQVEKS VAPDVFLLPG NREIFVSLGG DVRAMWLKRK IQHLA
101: SETVQTTRKV LLSRQKRMSM KINRRPEANA EPMEDAHHSS SSTPPRRGET RLPNSLLWTG WDRMFLVLPL RRLPEPFREK WYLRNTFIDS SKNYTNGIIA
201: DDSKRYLYTG ADLDHSEGEH DFVVERSPRL QSPMSKESSF HQTPPHLRAS SRDAHVFPQA VSQWQALPRS WHCSNKRNGN DRAMDDSSAN GNYKSSSHDW
301: QMSKLEDGYS ISRCVQILNG MVELSQVEKS VAPDVFLLPG NREIFVSLGG DVRAMWLKRK IQHLA
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.