Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G329200.1 | Wheat | plastid | 97.33 | 97.33 |
| TraesCS1A01G327100.1 | Wheat | plastid | 96.26 | 96.77 |
| HORVU1Hr1G078000.1 | Barley | plastid | 94.12 | 85.23 |
| Os05t0509400-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 79.14 | 79.14 |
| EES19781 | Sorghum | cytosol | 73.8 | 76.88 |
| Zm00001d038660_P003 | Maize | nucleus | 72.73 | 75.56 |
| Zm00001d010713_P006 | Maize | cytosol | 66.58 | 68.22 |
| TraesCS5B01G062200.1 | Wheat | nucleus, plastid | 36.63 | 38.06 |
| CDX79489 | Canola | cytosol | 16.58 | 19.2 |
| TraesCS3B01G249700.1 | Wheat | nucleus | 11.5 | 16.48 |
| TraesCS1B01G411800.1 | Wheat | nucleus | 11.5 | 16.41 |
| Bra001128.1-P | Field mustard | nucleus | 20.05 | 14.4 |
| CDX74164 | Canola | nucleus | 20.05 | 14.37 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 29.68 | 14.07 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 28.34 | 13.86 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 20.05 | 13.81 |
| TraesCS7B01G242300.1 | Wheat | nucleus | 16.84 | 12.99 |
| AT3G04850.1 | Thale cress | cytosol | 21.66 | 12.68 |
| TraesCS3B01G331700.1 | Wheat | plastid | 18.18 | 11.06 |
| TraesCS2B01G144400.2 | Wheat | plastid | 16.58 | 10.53 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G340500.1 | EnsemblPlantsGene:TraesCS1B01G340500 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF44 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| MapMan:15.5.9 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:568536817..568539304
Molecular Weight (calculated)
41406.9 Da
IEP (calculated)
8.124
GRAVY (calculated)
-0.706
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MEATPISVKP PSPAPPQPPH PHLTAAVPLS AMEPPPSPPP AVAAAAEGPD ALPDPGSMNQ LALATTPKRQ KVEDAADGCK HCACKKSRCL KLYCPCFAGG
101: GYCSEKCGCV PCFNKADFAE TVQTTRKVLL SRQKRMSLKI NRRLEANAET MEDAHNSSSS TPPRRGCNCK KSSCLKKYCD CYQDGTGCSL FCRCEDCKNP
201: YGKNEGFMAD ESKRFIYTGA DLDHSEDEHD FIVERSPRLQ SPISKESSFQ HTPPRSKASS RDTHLLPQVL SQWQPRSWQQ SSKRQGNDHR AVDDSGENNK
301: SSSHEWQLAK HQVQEDTYSI SRCVQILNGM VELSQVEKSV APDVFLHPGN REIFVSLGLD VRALWLKRKI QHLT
101: GYCSEKCGCV PCFNKADFAE TVQTTRKVLL SRQKRMSLKI NRRLEANAET MEDAHNSSSS TPPRRGCNCK KSSCLKKYCD CYQDGTGCSL FCRCEDCKNP
201: YGKNEGFMAD ESKRFIYTGA DLDHSEDEHD FIVERSPRLQ SPISKESSFQ HTPPRSKASS RDTHLLPQVL SQWQPRSWQQ SSKRQGNDHR AVDDSGENNK
301: SSSHEWQLAK HQVQEDTYSI SRCVQILNGM VELSQVEKSV APDVFLHPGN REIFVSLGLD VRALWLKRKI QHLT
001: MDTPQKSITQ IGTPISKSRF EDSPVFNYIN SLSPIRPVRS IPNPNQFSSL NFTSPPSVFT SPHLTSSHKE SRFFKTHNSS SSDPTNSVES QEDESTSHEE
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
Arabidopsis Description
TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.