Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89807 | Sorghum | cytosol | 86.89 | 87.23 |
| Os06t0332700-00 | Rice | nucleus | 40.31 | 67.99 |
| HORVU7Hr1G081540.1 | Barley | plastid | 38.75 | 67.81 |
| TraesCS7D01G338500.1 | Wheat | nucleus, plastid | 58.51 | 61.52 |
| TraesCS7A01G341100.2 | Wheat | nucleus, plastid | 58.51 | 61.52 |
| TraesCS7B01G242300.1 | Wheat | nucleus | 58.32 | 61.44 |
| Zm00001d015990_P001 | Maize | nucleus | 47.36 | 45.66 |
| CDY19795 | Canola | nucleus | 27.59 | 30.99 |
| Bra036551.1-P | Field mustard | nucleus | 27.4 | 30.7 |
| CDY65712 | Canola | nucleus | 27.01 | 30.13 |
| Zm00001d012688_P001 | Maize | nucleus | 36.01 | 29.97 |
| Zm00001d043378_P001 | Maize | nucleus | 35.62 | 29.79 |
| Bra009859.1-P | Field mustard | nucleus | 28.77 | 28.88 |
| AT5G25790.2 | Thale cress | nucleus | 28.38 | 28.77 |
| CDX88196 | Canola | nucleus | 28.57 | 28.63 |
| CDX80536 | Canola | nucleus | 28.18 | 27.75 |
| CDY28377 | Canola | nucleus | 17.81 | 27.74 |
| Bra021165.1-P | Field mustard | nucleus | 17.61 | 27.61 |
| CDY05340 | Canola | nucleus | 25.44 | 27.2 |
| CDY20184 | Canola | cytosol | 18.0 | 27.06 |
| AT3G16160.1 | Thale cress | nucleus | 19.18 | 26.63 |
| Zm00001d031008_P001 | Maize | nucleus | 12.52 | 16.24 |
| Zm00001d041444_P002 | Maize | nucleus | 12.13 | 15.74 |
| Zm00001d038660_P003 | Maize | nucleus | 10.96 | 15.56 |
| Zm00001d010713_P006 | Maize | cytosol | 7.83 | 10.96 |
| Zm00001d033274_P005 | Maize | nucleus | 14.68 | 10.22 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 16.24 | 9.93 |
| Zm00001d018930_P003 | Maize | nucleus | 16.05 | 9.93 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 15.85 | 9.74 |
Protein Annotations
| EnsemblPlants:Zm00001d037461_P001 | EnsemblPlants:Zm00001d037461_T001 | EnsemblPlantsGene:Zm00001d037461 | EntrezGene:100381595 | InterPro:CRC | InterPro:IPR005172 |
| InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF29 | PFAM:PF03638 | PFscan:PS51634 |
| ProteinID:AQK84034.1 | SMART:SM01114 | UniParc:UPI0008424A7C | UniProt:A0A1D6LY01 | MapMan:15.5.9 | : |
Description
CPP-transcription factor 12Protein tesmin/TSO1-like CXC 5
Coordinates
chr6:+:126010753..126018311
Molecular Weight (calculated)
56587.9 Da
IEP (calculated)
7.354
GRAVY (calculated)
-0.712
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEKQQMEP PAPALVREAG AEPRAPRQTQ QQPNTAVQVQ PSMPVLRPWP MEITLSMKPV VEMKSGTPAK KKKHCNCKNS QCLKLYCECF AAGDYCDGCN
101: CKQCGNTVEN EKGRQEAINN TKLRNPNAFQ PKIENGPIPS SVWKDAGALP SHPKHNKGCH CKKSGCLKKY CECFQANILC SKNCKCMDCK NYEGSEELRS
201: TTQGDNSCDR NNIQQAANVA LNGAIGSSGY RFSPVRRKRP PEDPHCQTLN VEGSMMQTQF RETNNVDVSQ MTSSTGRDGS TVNFQGTSKL VYRSPLANTI
301: HITDVNDLAN HLVIACRKAA ERFTTIVELK TSFCLDYFIA DNKVEMEIDK EICTNTDQKF DENKKGVQKA ALSQLGKVTD IDQQIVDDSR LHCSDTQDDA
401: RPASPGTQAL LCDEQDLTFG TVHRSSIPVA MHDQVISELH AAQESAVLKE LRNNLRLIIA RGKLNEGKSA SGTRMELDAL RHHESSTSLA PVRAEEKSNT
501: TDGPEITHEL K
101: CKQCGNTVEN EKGRQEAINN TKLRNPNAFQ PKIENGPIPS SVWKDAGALP SHPKHNKGCH CKKSGCLKKY CECFQANILC SKNCKCMDCK NYEGSEELRS
201: TTQGDNSCDR NNIQQAANVA LNGAIGSSGY RFSPVRRKRP PEDPHCQTLN VEGSMMQTQF RETNNVDVSQ MTSSTGRDGS TVNFQGTSKL VYRSPLANTI
301: HITDVNDLAN HLVIACRKAA ERFTTIVELK TSFCLDYFIA DNKVEMEIDK EICTNTDQKF DENKKGVQKA ALSQLGKVTD IDQQIVDDSR LHCSDTQDDA
401: RPASPGTQAL LCDEQDLTFG TVHRSSIPVA MHDQVISELH AAQESAVLKE LRNNLRLIIA RGKLNEGKSA SGTRMELDAL RHHESSTSLA PVRAEEKSNT
501: TDGPEITHEL K
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.