Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015990_P001 | Maize | nucleus | 82.69 | 84.72 |
| Os02t0274600-00 | Rice | cytosol, nucleus | 41.99 | 52.17 |
| EER89807 | Sorghum | cytosol | 43.65 | 46.56 |
| CDY19795 | Canola | nucleus | 24.49 | 29.23 |
| CDY65712 | Canola | nucleus | 24.49 | 29.04 |
| Bra036551.1-P | Field mustard | nucleus | 24.31 | 28.95 |
| KXG33424 | Sorghum | nucleus | 32.04 | 28.39 |
| Bra009859.1-P | Field mustard | nucleus | 26.34 | 28.09 |
| CDX88196 | Canola | nucleus | 26.34 | 28.04 |
| CDX80536 | Canola | nucleus | 26.34 | 27.55 |
| AT5G25790.2 | Thale cress | nucleus | 24.86 | 26.79 |
| CDY05340 | Canola | nucleus | 23.39 | 26.57 |
| CDY28377 | Canola | nucleus | 14.18 | 23.48 |
| AT3G16160.1 | Thale cress | nucleus | 15.84 | 23.37 |
| Bra021165.1-P | Field mustard | nucleus | 13.63 | 22.7 |
| CDY20184 | Canola | cytosol | 14.18 | 22.65 |
| EES19781 | Sorghum | cytosol | 10.87 | 16.43 |
| EES17352 | Sorghum | nucleus | 11.6 | 15.4 |
| OQU88523 | Sorghum | nucleus | 15.84 | 11.08 |
| EES17353 | Sorghum | nucleus | 14.92 | 10.56 |
| EER93767 | Sorghum | nucleus | 14.0 | 10.17 |
Protein Annotations
| EnsemblPlants:KXG30022 | EnsemblPlantsGene:SORBI_3004G124300 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF35 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:KXG30022 | ProteinID:KXG30022.1 |
| SEG:seg | SMART:SM01114 | UniParc:UPI0007F1A825 | UniProt:A0A194YP99 | MapMan:15.5.9 | : |
Description
hypothetical protein
Coordinates
chr4:-:14161807..14168977
Molecular Weight (calculated)
59449.3 Da
IEP (calculated)
7.368
GRAVY (calculated)
-0.779
Length
543 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQGRNQQQL SSPPPVLAAA SETKAPAVSS QQPKPAAPVM PVPRQWPMAF NPLKPSTEVK SVTPKKKKHC NCRNSKCLKM YCECFQELQY CDGCNCSNCG
101: NIVGNENARN EAIEAIRQRN PSAFQPKIEN GPNTLNVRKD NSGAVPVVAK HHKGCHCKKS GCLKKYCECY QANVFCSKNC RCMHCKNSEG NEDTETSSQR
201: DHASDRSHIQ QAANVAFNGT VGSSGYICSL SRKRSHEDAL GVRIKSEGSM PETQTQYQQG NHADVSPLAP CSTGFDRHNA ANSKSNNPIY RSPLANTIHL
301: REVNDLVKHL VMVCRMAEAK IAEEKGFQSN NGLSNGNCKQ QDFKETSSID ILSKGCSHQP NINEMGFHWS ETSNVSRPAS PTTQSLMCDE QNTTFGNEPA
401: SPTTQALMCE EQNTTFGNEP ASPTTQALMC EEQNTTFGND YKSSFPLVSR GQDISEINAV QENLVLTGLR QYLCTIIRRG RTNEQNSSLE ATMELDAGQH
501: HGAPPAFSAI ETEENFPSSS TIETPRTNQQ PTPNGGSKDS IAS
101: NIVGNENARN EAIEAIRQRN PSAFQPKIEN GPNTLNVRKD NSGAVPVVAK HHKGCHCKKS GCLKKYCECY QANVFCSKNC RCMHCKNSEG NEDTETSSQR
201: DHASDRSHIQ QAANVAFNGT VGSSGYICSL SRKRSHEDAL GVRIKSEGSM PETQTQYQQG NHADVSPLAP CSTGFDRHNA ANSKSNNPIY RSPLANTIHL
301: REVNDLVKHL VMVCRMAEAK IAEEKGFQSN NGLSNGNCKQ QDFKETSSID ILSKGCSHQP NINEMGFHWS ETSNVSRPAS PTTQSLMCDE QNTTFGNEPA
401: SPTTQALMCE EQNTTFGNEP ASPTTQALMC EEQNTTFGND YKSSFPLVSR GQDISEINAV QENLVLTGLR QYLCTIIRRG RTNEQNSSLE ATMELDAGQH
501: HGAPPAFSAI ETEENFPSSS TIETPRTNQQ PTPNGGSKDS IAS
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.