Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- extracellular 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 53.03 | 48.95 |
| CDY54821 | Canola | nucleus | 61.36 | 23.86 |
| AT3G22780.1 | Thale cress | nucleus | 62.12 | 23.6 |
| CDY10669 | Canola | nucleus | 60.98 | 21.52 |
| CDY54822 | Canola | cytosol, plastid | 39.77 | 19.13 |
| CDY29770 | Canola | nucleus, plastid | 45.83 | 18.7 |
| CDY42785 | Canola | nucleus, plastid | 45.83 | 18.42 |
| CDY10668 | Canola | nucleus, plastid | 39.77 | 18.29 |
| CDY64240 | Canola | cytosol, plastid | 40.15 | 17.79 |
| CDY67857 | Canola | nucleus, plastid | 40.53 | 17.72 |
| CDY44573 | Canola | cytosol | 8.71 | 16.2 |
| KRH77830 | Soybean | nucleus | 40.53 | 13.82 |
| KRH27657 | Soybean | nucleus | 40.53 | 13.82 |
| PGSC0003DMT400082098 | Potato | nucleus | 42.42 | 13.56 |
| Solyc09g082500.2.1 | Tomato | nucleus | 42.42 | 13.51 |
| KRH35487 | Soybean | nucleus | 38.26 | 13.29 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 37.12 | 13.28 |
| KRG91344 | Soybean | nucleus | 38.64 | 13.18 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 40.15 | 13.15 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 40.15 | 12.79 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 38.64 | 12.67 |
| Os12t0605500-01 | Rice | nucleus | 35.98 | 12.5 |
| CDX92957 | Canola | nucleus, plastid | 57.58 | 12.5 |
| CDX79489 | Canola | cytosol | 15.15 | 12.38 |
| CDX94892 | Canola | nucleus, plastid | 57.95 | 12.33 |
| EES17353 | Sorghum | nucleus | 34.85 | 11.99 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 34.47 | 11.9 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 34.47 | 11.9 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 34.47 | 11.9 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 34.09 | 11.75 |
| CDY71540 | Canola | nucleus, plastid | 11.74 | 11.7 |
| Os07t0176200-01 | Rice | nucleus | 34.47 | 11.64 |
| EER93767 | Sorghum | nucleus | 32.58 | 11.51 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 34.09 | 11.44 |
| OQU88523 | Sorghum | nucleus | 33.33 | 11.34 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 35.61 | 11.24 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 35.23 | 11.18 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 32.58 | 10.9 |
| Zm00001d033274_P005 | Maize | nucleus | 30.3 | 10.9 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 33.71 | 10.63 |
| CDY05722 | Canola | nucleus | 19.7 | 10.51 |
| CDY31991 | Canola | nucleus | 20.08 | 10.47 |
| CDY67603 | Canola | cytosol | 11.36 | 10.45 |
| CDY28377 | Canola | nucleus | 12.88 | 10.37 |
| CDY20184 | Canola | cytosol | 13.26 | 10.29 |
| Zm00001d018930_P003 | Maize | nucleus | 32.2 | 10.29 |
| CDY19795 | Canola | nucleus | 16.29 | 9.45 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 32.95 | 9.43 |
| CDX88196 | Canola | nucleus | 18.18 | 9.41 |
| CDY65712 | Canola | nucleus | 15.91 | 9.17 |
| CDX80536 | Canola | nucleus | 17.8 | 9.06 |
| CDX74164 | Canola | nucleus | 17.8 | 9.0 |
| CDY05340 | Canola | nucleus | 16.29 | 9.0 |
| CDX97461 | Canola | nucleus | 18.94 | 8.83 |
| CDX92907 | Canola | nucleus | 18.18 | 8.6 |
| CDY66476 | Canola | nucleus | 18.18 | 8.38 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 17.05 | 8.29 |
| CDY35239 | Canola | nucleus | 18.18 | 8.23 |
| Os03t0638300-01 | Rice | cytosol | 2.65 | 6.19 |
| CDY06853 | Canola | cytosol, nucleus, plastid | 18.18 | 3.41 |
Protein Annotations
| EnsemblPlants:CDY64242 | EnsemblPlantsGene:GSBRNA2T00041030001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| ncoils:Coil | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:CDY64242 |
| ProteinID:CDY64242.1 | SEG:seg | SMART:SM01114 | UniParc:UPI0004EE9A50 | UniProt:A0A078JFC6 | MapMan:15.5.9 |
Description
BnaCnng43520DBnaCnng43520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFC6]
Coordinates
chrLK034426:+:22878..24029
Molecular Weight (calculated)
29978.1 Da
IEP (calculated)
10.053
GRAVY (calculated)
-0.671
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTLSWLLVN RLNPEIPLHL LLKSSESQTP SWTLVQDDAS KTRASARHKR GCNCKKSNCL KKYCECFQSG VGCSINCRCE GSYLHAIMER RLEEDHETYE
101: KRTTKIQENK QVKQNPSSDQ PSTPLPPYRH LVDHQPSLSK NRLPPTQFFL GVGSSSFRKP ESYSTQSRNE TKPLETVTEE KTEIMYEILS NNPITTIKAI
201: SPNSKRVFPP KLGSSESGSI LVKRSNCRKL ILWSIPAFPS LKPKSVKKKP FYQPTVCIFV MGST
101: KRTTKIQENK QVKQNPSSDQ PSTPLPPYRH LVDHQPSLSK NRLPPTQFFL GVGSSSFRKP ESYSTQSRNE TKPLETVTEE KTEIMYEILS NNPITTIKAI
201: SPNSKRVFPP KLGSSESGSI LVKRSNCRKL ILWSIPAFPS LKPKSVKKKP FYQPTVCIFV MGST
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.