Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67857 | Canola | nucleus, plastid | 94.8 | 93.54 |
| Bra023810.1-P | Field mustard | nucleus, plastid | 92.62 | 93.24 |
| CDY10668 | Canola | nucleus, plastid | 69.3 | 71.95 |
| CDY54822 | Canola | cytosol, plastid | 66.11 | 71.77 |
| AT3G22760.1 | Thale cress | nucleus | 66.28 | 64.86 |
| Os03t0638300-01 | Rice | cytosol | 10.91 | 57.52 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 27.52 | 57.34 |
| CDY29770 | Canola | nucleus, plastid | 56.88 | 52.4 |
| CDY42785 | Canola | nucleus, plastid | 56.54 | 51.29 |
| CDY54821 | Canola | nucleus | 50.5 | 44.33 |
| CDY64242 | Canola | nucleus | 17.79 | 40.15 |
| CDY10669 | Canola | nucleus | 48.99 | 39.04 |
| KRH77830 | Soybean | nucleus | 47.82 | 36.82 |
| KRH35487 | Soybean | nucleus | 46.48 | 36.45 |
| KRH27657 | Soybean | nucleus | 47.32 | 36.43 |
| KRG91344 | Soybean | nucleus | 46.81 | 36.05 |
| PGSC0003DMT400082098 | Potato | nucleus | 46.14 | 33.29 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 44.63 | 33.0 |
| Solyc09g082500.2.1 | Tomato | nucleus | 45.81 | 32.93 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 40.6 | 32.79 |
| CDY44573 | Canola | cytosol | 7.55 | 31.69 |
| CDX79489 | Canola | cytosol | 16.78 | 30.96 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 41.28 | 30.56 |
| CDY71540 | Canola | nucleus, plastid | 13.42 | 30.19 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 41.78 | 30.04 |
| CDX74164 | Canola | nucleus | 25.5 | 29.12 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 37.25 | 29.02 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 37.08 | 28.89 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 37.08 | 28.89 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 37.08 | 28.85 |
| CDY67603 | Canola | cytosol | 13.59 | 28.22 |
| OQU88523 | Sorghum | nucleus | 36.58 | 28.09 |
| EES17353 | Sorghum | nucleus | 36.07 | 28.03 |
| Os12t0605500-01 | Rice | nucleus | 35.74 | 28.03 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 25.5 | 27.99 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 36.74 | 27.83 |
| Os07t0176200-01 | Rice | nucleus | 36.07 | 27.49 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 35.91 | 27.12 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 36.91 | 26.44 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 36.58 | 26.08 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 36.58 | 26.05 |
| Zm00001d018930_P003 | Maize | nucleus | 35.4 | 25.54 |
| EER93767 | Sorghum | nucleus | 31.71 | 25.3 |
| CDX92957 | Canola | nucleus, plastid | 50.67 | 24.84 |
| CDX94892 | Canola | nucleus, plastid | 50.5 | 24.25 |
| Zm00001d033274_P005 | Maize | nucleus | 29.36 | 23.84 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 36.07 | 23.29 |
| CDY19795 | Canola | nucleus | 16.11 | 21.1 |
| CDY20184 | Canola | cytosol | 11.24 | 19.71 |
| CDY65712 | Canola | nucleus | 15.1 | 19.65 |
| CDY05722 | Canola | nucleus | 16.28 | 19.6 |
| CDY28377 | Canola | nucleus | 10.74 | 19.51 |
| CDX88196 | Canola | nucleus | 16.61 | 19.41 |
| CDY31991 | Canola | nucleus | 16.44 | 19.37 |
| CDY05340 | Canola | nucleus | 15.44 | 19.25 |
| CDX80536 | Canola | nucleus | 16.61 | 19.08 |
| CDX97461 | Canola | nucleus | 16.44 | 17.31 |
| CDY66476 | Canola | nucleus | 16.61 | 17.28 |
| CDX92907 | Canola | nucleus | 15.44 | 16.49 |
| CDY35239 | Canola | nucleus | 15.94 | 16.3 |
| CDY06853 | Canola | cytosol, nucleus, plastid | 15.77 | 6.68 |
Protein Annotations
| EnsemblPlants:CDY64240 | EnsemblPlantsGene:GSBRNA2T00041026001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:CDY64240 | ProteinID:CDY64240.1 |
| SEG:seg | SMART:SM01114 | UniParc:UPI0004EEE488 | UniProt:A0A078JDA3 | MapMan:15.5.9 | : |
Description
BnaCnng43510DBnaCnng43510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDA3]
Coordinates
chrLK034426:+:3517..6208
Molecular Weight (calculated)
65472.8 Da
IEP (calculated)
7.488
GRAVY (calculated)
-0.626
Length
596 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRFYLGLF KGFDGSDNSP VFNYINSLSP ITTVKSISNA QTFSSLSFTS PPPVFTTPHV ASHKGSRFRS HSNSSDPSNK VVEEALLEKE PPQILNNECL
101: TTTPRVTNDG ACEYGETDLQ KMCDDNVKRK SDTPDWETLI SDSSDMLIYG SPNDSEAFRC FLQRSSDSKT RLCDGGSKPA LVAPVSQSNE PESSDALSIL
201: HRGVRRRCLD FEMPRNNNQT PRCVVPSIGL HLNAIAMSSK DNNNVSKEYS FTGNVKVGLQ SSTTPVLPSD DIGRDNEIRE AAGVEEAPLS LALVEVNQSS
301: PKKKRQVSEQ AGEGESSCKR CNCKKSKCLK LYCECFAAGV YCIEPCSCID CFNKPIHEDT VLATRKQIES RNPLAFAPKV IRNSDSTIEV GEDASKTPAS
401: ARHKRGCNCK KSNCLKKYCE CYQSGVGCSI NCRCEGCKNA FGRKDGSSFA GMDTEQDQEN ETSGKSGTTI PLPPSTPMPL RQPLAQLPIS SNNMLPSQQS
501: QQHLHGASLY NSQSFRKQDM GLMSHSRIET IAEERAEDIE NFIHSPVTNI NALSPNSKRV SLPHMDSTET THWRRNGGRK LLLSSIPTFP SLTPHH
101: TTTPRVTNDG ACEYGETDLQ KMCDDNVKRK SDTPDWETLI SDSSDMLIYG SPNDSEAFRC FLQRSSDSKT RLCDGGSKPA LVAPVSQSNE PESSDALSIL
201: HRGVRRRCLD FEMPRNNNQT PRCVVPSIGL HLNAIAMSSK DNNNVSKEYS FTGNVKVGLQ SSTTPVLPSD DIGRDNEIRE AAGVEEAPLS LALVEVNQSS
301: PKKKRQVSEQ AGEGESSCKR CNCKKSKCLK LYCECFAAGV YCIEPCSCID CFNKPIHEDT VLATRKQIES RNPLAFAPKV IRNSDSTIEV GEDASKTPAS
401: ARHKRGCNCK KSNCLKKYCE CYQSGVGCSI NCRCEGCKNA FGRKDGSSFA GMDTEQDQEN ETSGKSGTTI PLPPSTPMPL RQPLAQLPIS SNNMLPSQQS
501: QQHLHGASLY NSQSFRKQDM GLMSHSRIET IAEERAEDIE NFIHSPVTNI NALSPNSKRV SLPHMDSTET THWRRNGGRK LLLSSIPTFP SLTPHH
001: MDTPEKSETQ IGTPVSKLKV EDSPVFSYIC NLSPIKTIKP IPITCPLSSL NYASPPSVFT SPHAVSHKES RFRSQKDVSA SKEVGEEEAL VGSEPEQSYK
101: NDCNTPRVTN DVKDNGCGKD LQVMMDNVKK KSDTPDWETL IAATTELIYG SPRESEAFSC LLKKTSNSEA RLRGSITATS VAVTNTDVVN NESESVDALS
201: ILHRGVRRRC LDFEVKGNNQ QTLGESSSSC VVPSIGLHLN TIAMSSKDKN VANEYSFSGN IKVGVQSSLT PVLHSQHDIV RENESGKDSG QIIEVVPKSL
301: ASVDLTPISP KKKRRKSEQS GEGDSSCKRC NCKKSKCLKL YCECFAAGFY CIEPCSCINC FNKPIHKDVV LATRKQIESR NPLAFAPKVI RNSDSIIEVG
401: EDASKTPASA RHKRGCNCKK SNCLKKYCEC YQGGVGCSIN CRCEGCKNAF GRKDGSLFEQ DEENETSGTP GTKKTQQNVE LFKPAAPPST PIPFRQPLAQ
501: LPISSNNRLL PPQSHFHHGA IGSSSSGIYN IRKPDMSLLS HSRIETITED IDDMSENLIH SPITTLSPNS KRVSLSHLDS PESTPWRRNG GGRNLIRSFP
601: TFPSLTPHH
101: NDCNTPRVTN DVKDNGCGKD LQVMMDNVKK KSDTPDWETL IAATTELIYG SPRESEAFSC LLKKTSNSEA RLRGSITATS VAVTNTDVVN NESESVDALS
201: ILHRGVRRRC LDFEVKGNNQ QTLGESSSSC VVPSIGLHLN TIAMSSKDKN VANEYSFSGN IKVGVQSSLT PVLHSQHDIV RENESGKDSG QIIEVVPKSL
301: ASVDLTPISP KKKRRKSEQS GEGDSSCKRC NCKKSKCLKL YCECFAAGFY CIEPCSCINC FNKPIHKDVV LATRKQIESR NPLAFAPKVI RNSDSIIEVG
401: EDASKTPASA RHKRGCNCKK SNCLKKYCEC YQGGVGCSIN CRCEGCKNAF GRKDGSLFEQ DEENETSGTP GTKKTQQNVE LFKPAAPPST PIPFRQPLAQ
501: LPISSNNRLL PPQSHFHHGA IGSSSSGIYN IRKPDMSLLS HSRIETITED IDDMSENLIH SPITTLSPNS KRVSLSHLDS PESTPWRRNG GGRNLIRSFP
601: TFPSLTPHH
Arabidopsis Description
TCX3Protein tesmin/TSO1-like CXC 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L548]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.