Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92957 | Canola | nucleus, plastid | 85.58 | 87.34 |
| CDY54821 | Canola | nucleus | 40.21 | 73.49 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 16.84 | 73.08 |
| AT3G22780.1 | Thale cress | nucleus | 39.16 | 69.93 |
| CDY10669 | Canola | nucleus | 40.13 | 66.58 |
| CDY64242 | Canola | nucleus | 12.33 | 57.95 |
| Os03t0638300-01 | Rice | cytosol | 4.83 | 53.1 |
| CDY29770 | Canola | nucleus, plastid | 27.64 | 53.01 |
| CDY42785 | Canola | nucleus, plastid | 27.64 | 52.21 |
| CDY67857 | Canola | nucleus, plastid | 25.14 | 51.66 |
| CDY54822 | Canola | cytosol, plastid | 22.64 | 51.18 |
| CDY10668 | Canola | nucleus, plastid | 23.61 | 51.05 |
| CDY64240 | Canola | cytosol, plastid | 24.25 | 50.5 |
| PGSC0003DMT400082098 | Potato | nucleus | 25.46 | 38.26 |
| Solyc09g082500.2.1 | Tomato | nucleus | 25.46 | 38.12 |
| KRH77830 | Soybean | nucleus | 23.21 | 37.21 |
| KRH27657 | Soybean | nucleus | 23.13 | 37.08 |
| KRH35487 | Soybean | nucleus | 22.0 | 35.92 |
| KRG91344 | Soybean | nucleus | 22.24 | 35.66 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 22.88 | 35.24 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 20.71 | 34.82 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 21.51 | 33.17 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 21.11 | 31.6 |
| CDX79489 | Canola | cytosol | 8.14 | 31.27 |
| CDX74164 | Canola | nucleus | 12.97 | 30.84 |
| CDY44573 | Canola | cytosol | 3.46 | 30.28 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 19.18 | 30.24 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 18.61 | 30.2 |
| Os07t0176200-01 | Rice | nucleus | 19.02 | 30.18 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 18.61 | 30.16 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 18.53 | 30.07 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 18.53 | 30.07 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 13.13 | 30.02 |
| Os12t0605500-01 | Rice | nucleus | 18.21 | 29.74 |
| OQU88523 | Sorghum | nucleus | 18.45 | 29.51 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 18.53 | 29.15 |
| EES17353 | Sorghum | nucleus | 17.73 | 28.68 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 19.02 | 28.2 |
| CDY71540 | Canola | nucleus, plastid | 5.96 | 27.92 |
| Zm00001d018930_P003 | Maize | nucleus | 18.29 | 27.48 |
| CDY67603 | Canola | cytosol | 6.2 | 26.83 |
| EER93767 | Sorghum | nucleus | 16.04 | 26.64 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 17.73 | 26.44 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 17.81 | 26.44 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 19.02 | 25.57 |
| Zm00001d033274_P005 | Maize | nucleus | 14.91 | 25.2 |
| CDY19795 | Canola | nucleus | 7.98 | 21.76 |
| CDY20184 | Canola | cytosol | 5.8 | 21.18 |
| CDY28377 | Canola | nucleus | 5.56 | 21.04 |
| CDX88196 | Canola | nucleus | 8.38 | 20.39 |
| CDX80536 | Canola | nucleus | 8.38 | 20.04 |
| CDY05722 | Canola | nucleus | 7.98 | 20.0 |
| CDY31991 | Canola | nucleus | 8.14 | 19.96 |
| CDY05340 | Canola | nucleus | 7.33 | 19.04 |
| CDY65712 | Canola | nucleus | 6.93 | 18.78 |
| CDX97461 | Canola | nucleus | 8.46 | 18.55 |
| CDX92907 | Canola | nucleus | 8.22 | 18.28 |
| CDY66476 | Canola | nucleus | 8.3 | 17.98 |
| CDY35239 | Canola | nucleus | 8.14 | 17.32 |
| CDY06853 | Canola | cytosol, nucleus, plastid | 11.68 | 10.3 |
Protein Annotations
| EnsemblPlants:CDX94892 | EnsemblPlantsGene:GSBRNA2T00158450001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| ncoils:Coil | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:CDX94892 |
| ProteinID:CDX94892.1 | SEG:seg | SMART:SM01114 | UniParc:UPI0004EEF41E | MapMan:15.5.9 | : |
Description
BnaC03g42960D
Coordinates
chrLK031885:-:1370242..1377983
Molecular Weight (calculated)
137175.0 Da
IEP (calculated)
7.146
GRAVY (calculated)
-0.690
Length
1241 amino acids
Sequence
(BLAST)
(BLAST)
0001: METPQKTIIQ NGTPVSKLKN SPVFNYINNL SPIKPVRLIP IAQTFGSLSP SVYTPPHKGS RFKSHTYFSD PSKELVEEAL LETIPPEILK NDCISTPPRR
0101: AAANDGSCGD GETDLQRMCD GNVKRKSDTP DWETQFPDTP EMLIYDTLND SEADRCFLPA SSDSKRRSCG GTKPRLEPVS NSKELADSLH RGVRRRLLDF
0201: EMPYKQTSEK SSSSCVVPPS TVLHLNAFAM SFKDINVGNE YSLSGNIKAG LQKFENETGE AAGQSVVEEV QKSSLALVEM NQSSPKKKRL KSGQAGEGES
0301: ACKRCHCKKS KCLKLYCECF AAGVYCLESC SCVDCYNKPI HEDIVLATRK QIESRNPIAF APKVIRNTDS SIMEAGVDAS KTPASVRHKR GCNCRKSNCV
0401: KKYCECYQSG VGCSINCRCE GCKNAFGKKD VSSFVGMDIK QDDVSETWKT QQNNELVRYV PLPPSTPMLL RQPLAQLPIS SNNMLLPQQS QHLHGASGSS
0501: LYESQSFRKQ GTSLLSHSRT EKIIEDIENL IQSPITNINA VSPNSKRVSL PHLDSPELTP RRRNAAWKMD NENSQKEPAS KIETPTPKSK FEDSPVFNFI
0601: NNLSPFEPVK SFSSAQTFSS LSFTSPPPVF ASPHPNFHRE SRFFRCQHSV DRSKALGDGS VSKEDREVDL NKDATLEDDE EEDTETSCEL PQILSSDGQS
0701: PPHHGEDIVT QTLLPPSDPP LGEDNNGSSM NRLQKIPDSQ EEENGTPDSR RLMADAAAEL LVFRSPNDSE AFTCLVDKIS SSERRFFAGV KHHDIIPANG
0801: SSNDNEPLAV VPNQLVSNVH CGSMRRRCLD FEVPGKRKKD DDQQTVCDNN KPESSSSKCV VPGIGLHLNA IAMASSNTKI SITHEYSSSE EVQNTFSGSI
0901: TPVHSQDTVP ETLDQAESQP GEEAPKALVF EELIPDSFQK KKQVLEGGEG ESSCKRCNCK KSKCLKLYCE CFAAGVYCIE PCSCVDCFNK PIHEDTVLAT
1001: RKQIESRNPL AFAPKVIRNS DSSIMDTSDD ASKTPASARH KRGCNCKKSN CLKKYCECYQ SGVGCSINCR CEGCKNAFGR KDAYLHTIME SKQEDDHETY
1101: EKRTEKIQQN SKEVEQNPQP STPLPPYRNL VVHQPFLSRN KLPPTQFFLG AGSSSFRKPD CDVTQSMNEK KSLETVTEDK TEIMPDILNT SPIKANSPNS
1201: KRVSPAHIGP SEPGSILGKR SNGRKLILRS IPAFPSLNPN Q
0101: AAANDGSCGD GETDLQRMCD GNVKRKSDTP DWETQFPDTP EMLIYDTLND SEADRCFLPA SSDSKRRSCG GTKPRLEPVS NSKELADSLH RGVRRRLLDF
0201: EMPYKQTSEK SSSSCVVPPS TVLHLNAFAM SFKDINVGNE YSLSGNIKAG LQKFENETGE AAGQSVVEEV QKSSLALVEM NQSSPKKKRL KSGQAGEGES
0301: ACKRCHCKKS KCLKLYCECF AAGVYCLESC SCVDCYNKPI HEDIVLATRK QIESRNPIAF APKVIRNTDS SIMEAGVDAS KTPASVRHKR GCNCRKSNCV
0401: KKYCECYQSG VGCSINCRCE GCKNAFGKKD VSSFVGMDIK QDDVSETWKT QQNNELVRYV PLPPSTPMLL RQPLAQLPIS SNNMLLPQQS QHLHGASGSS
0501: LYESQSFRKQ GTSLLSHSRT EKIIEDIENL IQSPITNINA VSPNSKRVSL PHLDSPELTP RRRNAAWKMD NENSQKEPAS KIETPTPKSK FEDSPVFNFI
0601: NNLSPFEPVK SFSSAQTFSS LSFTSPPPVF ASPHPNFHRE SRFFRCQHSV DRSKALGDGS VSKEDREVDL NKDATLEDDE EEDTETSCEL PQILSSDGQS
0701: PPHHGEDIVT QTLLPPSDPP LGEDNNGSSM NRLQKIPDSQ EEENGTPDSR RLMADAAAEL LVFRSPNDSE AFTCLVDKIS SSERRFFAGV KHHDIIPANG
0801: SSNDNEPLAV VPNQLVSNVH CGSMRRRCLD FEVPGKRKKD DDQQTVCDNN KPESSSSKCV VPGIGLHLNA IAMASSNTKI SITHEYSSSE EVQNTFSGSI
0901: TPVHSQDTVP ETLDQAESQP GEEAPKALVF EELIPDSFQK KKQVLEGGEG ESSCKRCNCK KSKCLKLYCE CFAAGVYCIE PCSCVDCFNK PIHEDTVLAT
1001: RKQIESRNPL AFAPKVIRNS DSSIMDTSDD ASKTPASARH KRGCNCKKSN CLKKYCECYQ SGVGCSINCR CEGCKNAFGR KDAYLHTIME SKQEDDHETY
1101: EKRTEKIQQN SKEVEQNPQP STPLPPYRNL VVHQPFLSRN KLPPTQFFLG AGSSSFRKPD CDVTQSMNEK KSLETVTEDK TEIMPDILNT SPIKANSPNS
1201: KRVSPAHIGP SEPGSILGKR SNGRKLILRS IPAFPSLNPN Q
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.