Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011075.1-P | Field mustard | nucleus | 88.51 | 97.73 |
| CDY71540 | Canola | nucleus, plastid | 38.08 | 83.77 |
| CDY67603 | Canola | cytosol | 40.65 | 82.58 |
| CDX97461 | Canola | nucleus | 78.56 | 80.92 |
| CDY44573 | Canola | cytosol | 19.38 | 79.58 |
| CDY66476 | Canola | nucleus | 77.19 | 78.53 |
| AT4G29000.1 | Thale cress | nucleus | 79.42 | 76.78 |
| CDX92907 | Canola | nucleus | 71.87 | 75.09 |
| CDY05722 | Canola | nucleus | 56.6 | 66.67 |
| CDY31991 | Canola | nucleus | 57.12 | 65.81 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 51.11 | 56.87 |
| KRH39300 | Soybean | nucleus | 53.52 | 55.81 |
| KRH48373 | Soybean | nucleus | 52.14 | 54.09 |
| PGSC0003DMT400000824 | Potato | plastid | 44.77 | 53.48 |
| KRH41552 | Soybean | nucleus | 50.43 | 53.36 |
| KRH60264 | Soybean | nucleus | 51.29 | 53.3 |
| Solyc12g007180.1.1 | Tomato | nucleus | 44.08 | 51.61 |
| CDY06853 | Canola | cytosol, nucleus, plastid | 94.68 | 39.2 |
| CDX88196 | Canola | nucleus | 33.28 | 38.04 |
| CDY19795 | Canola | nucleus | 29.33 | 37.58 |
| CDX80536 | Canola | nucleus | 32.93 | 36.99 |
| CDY65712 | Canola | nucleus | 28.99 | 36.9 |
| CDY05340 | Canola | nucleus | 27.27 | 33.26 |
| CDY28377 | Canola | nucleus | 17.84 | 31.71 |
| CDY20184 | Canola | cytosol | 18.18 | 31.18 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 12.01 | 24.48 |
| CDY64242 | Canola | nucleus | 8.23 | 18.18 |
| CDX79489 | Canola | cytosol | 9.78 | 17.65 |
| CDY54822 | Canola | cytosol, plastid | 15.44 | 16.39 |
| CDY67857 | Canola | nucleus, plastid | 16.81 | 16.23 |
| CDY64240 | Canola | cytosol, plastid | 16.3 | 15.94 |
| CDY10668 | Canola | nucleus, plastid | 15.44 | 15.68 |
| CDY42785 | Canola | nucleus, plastid | 17.15 | 15.22 |
| CDY29770 | Canola | nucleus, plastid | 16.81 | 15.15 |
| CDY54821 | Canola | nucleus | 17.15 | 14.73 |
| CDX74164 | Canola | nucleus | 12.86 | 14.37 |
| CDY40681 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 12.52 | 13.44 |
| CDY10669 | Canola | nucleus | 16.64 | 12.97 |
| CDX92957 | Canola | nucleus, plastid | 16.98 | 8.14 |
| CDX94892 | Canola | nucleus, plastid | 17.32 | 8.14 |
Protein Annotations
| EnsemblPlants:CDY35239 | EnsemblPlantsGene:GSBRNA2T00058153001 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF14 | PFAM:PF03638 | PFscan:PS51634 | ProteinID:CDY35239 | ProteinID:CDY35239.1 |
| SEG:seg | SMART:SM01114 | UniParc:UPI0004EEC086 | UniProt:A0A078HCN6 | MapMan:15.5.9 | : |
Description
BnaA01g07920DBnaA01g07920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCN6]
Coordinates
chrLK032348:+:299194..302358
Molecular Weight (calculated)
62113.8 Da
IEP (calculated)
8.324
GRAVY (calculated)
-0.635
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGGGGGGE FPPKKEGVTD ESGFPAKTPA RQLDFTGGSA EHSLSKPAPP TVVSTAVKTI ATPSVSSSPI TTTMASRLHP VVRPTVPVVA TNSPSQLQIL
101: NAPIRHPKPE SPISRARPIV EGRDGTPQKK KQCNCKHSRC LKLYCECFAS GTYCDGCNCV NCFNNVDNEP ARRDAVEATL ERNPNAFRPK IASSPHGVRD
201: KREEIGEVVL LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCRCLDCKN FDGSEERQAL FHGEHANNMA YLQQAANAAI TGAVGSSGFA PSPAPKRRKG
301: HDISFNQATK DSSTHRLGQF QQANNGRTSG PTSGASPATV SRPGGNSSAA PSKFVYRSLL ADIIQPQDVK ALCSVLVAVA GEAAKTLTDK RNERETCLAS
401: SAQDNSQGNK DVEMVAADAN QADKSGPEGS NSDASKGNPL SPATLALMCD EQDTIFMVAA AEPNGSVDPG GCGTNSQEKS ETYAEQERVV LTKFRDCLSR
501: LISYAEIKES KCSYLARRHI QPPPTASATV KTENGIQQIP EPRTTAQPTL TKPQPLQPTT TTNTSTTQHP HKPPAFPEKK DST
101: NAPIRHPKPE SPISRARPIV EGRDGTPQKK KQCNCKHSRC LKLYCECFAS GTYCDGCNCV NCFNNVDNEP ARRDAVEATL ERNPNAFRPK IASSPHGVRD
201: KREEIGEVVL LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCRCLDCKN FDGSEERQAL FHGEHANNMA YLQQAANAAI TGAVGSSGFA PSPAPKRRKG
301: HDISFNQATK DSSTHRLGQF QQANNGRTSG PTSGASPATV SRPGGNSSAA PSKFVYRSLL ADIIQPQDVK ALCSVLVAVA GEAAKTLTDK RNERETCLAS
401: SAQDNSQGNK DVEMVAADAN QADKSGPEGS NSDASKGNPL SPATLALMCD EQDTIFMVAA AEPNGSVDPG GCGTNSQEKS ETYAEQERVV LTKFRDCLSR
501: LISYAEIKES KCSYLARRHI QPPPTASATV KTENGIQQIP EPRTTAQPTL TKPQPLQPTT TTNTSTTQHP HKPPAFPEKK DST
001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP
Arabidopsis Description
TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.