Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400082098 | Potato | nucleus | 96.5 | 96.85 |
| VIT_05s0020g03880.t01 | Wine grape | nucleus | 53.92 | 58.58 |
| CDY34235 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.7 | 54.2 |
| Os03t0638300-01 | Rice | cytosol | 7.24 | 53.1 |
| KRH77830 | Soybean | nucleus | 47.04 | 50.39 |
| KRH27657 | Soybean | nucleus | 45.72 | 48.97 |
| AT4G14770.1 | Thale cress | nucleus | 39.2 | 48.22 |
| CDY29770 | Canola | nucleus, plastid | 37.39 | 47.91 |
| CDY10668 | Canola | nucleus, plastid | 33.17 | 47.91 |
| CDY54822 | Canola | cytosol, plastid | 31.73 | 47.91 |
| KRH35487 | Soybean | nucleus | 43.79 | 47.76 |
| Bra036900.1-P | Field mustard | nucleus, plastid | 37.03 | 47.6 |
| KRG91344 | Soybean | nucleus | 44.15 | 47.29 |
| CDY42785 | Canola | nucleus, plastid | 37.15 | 46.88 |
| CDY67857 | Canola | nucleus, plastid | 34.14 | 46.85 |
| Bra023810.1-P | Field mustard | nucleus, plastid | 33.05 | 46.28 |
| CDY64240 | Canola | cytosol, plastid | 32.93 | 45.81 |
| Bra033920.1-P | Field mustard | plastid | 31.73 | 45.74 |
| AT3G22780.1 | Thale cress | nucleus | 38.0 | 45.32 |
| CDY54821 | Canola | nucleus | 36.91 | 45.07 |
| AT3G22760.1 | Thale cress | nucleus | 32.81 | 44.66 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 43.18 | 44.42 |
| CDY64242 | Canola | nucleus | 13.51 | 42.42 |
| CDY10669 | Canola | nucleus | 37.03 | 41.04 |
| Bra033919.1-P | Field mustard | nucleus | 36.79 | 40.78 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 39.45 | 40.62 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 36.07 | 40.51 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 37.52 | 37.52 |
| OQU88523 | Sorghum | nucleus | 31.97 | 34.15 |
| Os07t0176200-01 | Rice | nucleus | 31.97 | 33.89 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 31.73 | 33.42 |
| Os12t0605500-01 | Rice | nucleus | 30.28 | 33.03 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 30.16 | 32.64 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 31.0 | 32.57 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 30.04 | 32.55 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 29.92 | 32.42 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 29.55 | 32.03 |
| Zm00001d018930_P003 | Maize | nucleus | 31.6 | 31.72 |
| EES17353 | Sorghum | nucleus | 28.95 | 31.29 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 31.24 | 30.94 |
| EER93767 | Sorghum | nucleus | 26.54 | 29.45 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 28.83 | 28.59 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 28.11 | 28.0 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 31.12 | 27.95 |
| Zm00001d033274_P005 | Maize | nucleus | 24.49 | 27.66 |
| CDX92957 | Canola | nucleus, plastid | 38.36 | 26.15 |
| Bra001884.1-P | Field mustard | nucleus, plastid | 38.48 | 26.08 |
| CDX94892 | Canola | nucleus, plastid | 38.12 | 25.46 |
| Solyc08g067150.2.1 | Tomato | nucleus | 25.09 | 21.05 |
| Solyc12g007180.1.1 | Tomato | nucleus | 11.94 | 19.88 |
| Solyc07g020710.2.1 | Tomato | nucleus | 12.42 | 18.07 |
Protein Annotations
| EnsemblPlants:Solyc09g082500.2.1 | EnsemblPlantsGene:Solyc09g082500.2 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| UniParc:UPI000276C151 | UniProt:K4CVM7 | MapMan:15.5.9 | : | : | : |
Description
No Description!
Coordinates
chr9:+:68217090..68223600
Molecular Weight (calculated)
89423.6 Da
IEP (calculated)
5.877
GRAVY (calculated)
-0.634
Length
829 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKKEGGNEK VSLESENVEV EVEAEGRKSE VSVKGEEGGG GGGGGVVVVM DTPERNKSQI ATPISKFEES PFSNFLNNLS PIKPVKAAHF PQTLNTLSFG
101: SIPSVFTSPH VSSARESRFL RRHLLSDPSK PEFASDNSGK VDNDEGMSDA VNSSNEPKES LGSQNSVVEA SNECSKLAVE RTLNYECNDS PSTLPTGSFR
201: GKSLSEFAGS SVTYVPLVQG MSGKGLLRCE VNTEGKNELD PNKEAPGCDW ENLICDATDL LIFDSPGDPE AFTKAAGPNL RHFGFASNEM QNMQVFGQAS
301: TSECGVDGSE TEKPSTQPAD ETQVNEYAEN QKMKPDSSLT NDGIGVGQSE RTDNEMVSTL YRGMRRRCLV FEMVGSRRKH VDEGSGSSAV QGTDGNLACN
401: EKQLVPYKAV SESSRCILPG IGLHLNALAA SSKDGKVVKH ETNASGKQLL ITPGSAVSLH PLVAGQESMS KSLPETSQEI VPFENSVPLM EDASLAPGYV
501: NNEELSQTSP KKKRRRLEPG EGEACKRCNC KKSKCLKLYC ECFAAGVYCV EPCACQDCFN KPIHEDTVLA TRKQIESRNP LAFAPKVIRN ADTISETGDD
601: SSKTPASARH KRGCNCKKSG CLKKYCECYQ GGVGCSINCR CEGCKNAFGR KDGSVFIGTD GDAEEEETDA YEKSTVDRAS HKNLLHSDVE LNPDSTVPAT
701: PLAFRRPPMQ LPFSLKNKPP RSSFLSIGSS SGIFAGQGVG RPDFFQPQPQ PQPQPKFEKP FESVKEDEMP EILQQGGTSS PISGIKTASP NRKRVSPPHC
801: DFANSPSRRS SRKLILQSIP SFPSLTPNP
101: SIPSVFTSPH VSSARESRFL RRHLLSDPSK PEFASDNSGK VDNDEGMSDA VNSSNEPKES LGSQNSVVEA SNECSKLAVE RTLNYECNDS PSTLPTGSFR
201: GKSLSEFAGS SVTYVPLVQG MSGKGLLRCE VNTEGKNELD PNKEAPGCDW ENLICDATDL LIFDSPGDPE AFTKAAGPNL RHFGFASNEM QNMQVFGQAS
301: TSECGVDGSE TEKPSTQPAD ETQVNEYAEN QKMKPDSSLT NDGIGVGQSE RTDNEMVSTL YRGMRRRCLV FEMVGSRRKH VDEGSGSSAV QGTDGNLACN
401: EKQLVPYKAV SESSRCILPG IGLHLNALAA SSKDGKVVKH ETNASGKQLL ITPGSAVSLH PLVAGQESMS KSLPETSQEI VPFENSVPLM EDASLAPGYV
501: NNEELSQTSP KKKRRRLEPG EGEACKRCNC KKSKCLKLYC ECFAAGVYCV EPCACQDCFN KPIHEDTVLA TRKQIESRNP LAFAPKVIRN ADTISETGDD
601: SSKTPASARH KRGCNCKKSG CLKKYCECYQ GGVGCSINCR CEGCKNAFGR KDGSVFIGTD GDAEEEETDA YEKSTVDRAS HKNLLHSDVE LNPDSTVPAT
701: PLAFRRPPMQ LPFSLKNKPP RSSFLSIGSS SGIFAGQGVG RPDFFQPQPQ PQPQPKFEKP FESVKEDEMP EILQQGGTSS PISGIKTASP NRKRVSPPHC
801: DFANSPSRRS SRKLILQSIP SFPSLTPNP
001: MDTPQKSITQ IGTPISKSRF EDSPVFNYIN SLSPIRPVRS IPNPNQFSSL NFTSPPSVFT SPHLTSSHKE SRFFKTHNSS SSDPTNSVES QEDESTSHEE
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
Arabidopsis Description
TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.