Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400082098 | Potato | nucleus | 58.72 | 54.24 |
| Solyc09g082500.2.1 | Tomato | nucleus | 58.58 | 53.92 |
| Os03t0638300-01 | Rice | cytosol | 7.86 | 53.1 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 53.21 | 50.37 |
| GSMUA_Achr8P20460_001 | Banana | nucleus | 44.95 | 42.61 |
| GSMUA_Achr9P10600_001 | Banana | nucleus | 40.37 | 41.73 |
| GSMUA_Achr9P25670_001 | Banana | nucleus | 42.2 | 38.84 |
| TraesCS5A01G053800.1 | Wheat | nucleus | 35.52 | 35.42 |
| TraesCS5D01G065300.1 | Wheat | nucleus | 35.52 | 35.42 |
| HORVU5Hr1G012950.1 | Barley | nucleus | 35.52 | 35.38 |
| TraesCS5B01G062400.1 | Wheat | nucleus | 35.39 | 35.29 |
| Os12t0605500-01 | Rice | nucleus | 34.6 | 34.74 |
| Os07t0176200-01 | Rice | nucleus | 35.52 | 34.65 |
| OQU88523 | Sorghum | nucleus | 35.12 | 34.54 |
| TraesCS4D01G026100.1 | Wheat | nucleus | 35.26 | 34.18 |
| EES17353 | Sorghum | nucleus | 34.34 | 34.16 |
| TraesCS4B01G028500.1 | Wheat | nucleus | 34.73 | 33.59 |
| TraesCS4A01G284600.2 | Wheat | nucleus | 35.26 | 32.14 |
| VIT_09s0002g06020.t01 | Wine grape | nucleus | 13.5 | 31.6 |
| Zm00001d041445_P007 | Maize | golgi, nucleus, plasma membrane | 34.6 | 31.58 |
| Zm00001d018930_P003 | Maize | nucleus | 33.95 | 31.36 |
| EER93767 | Sorghum | nucleus | 30.41 | 31.06 |
| Zm00001d031009_P004 | Maize | golgi, plasma membrane | 33.55 | 30.77 |
| Zm00001d033274_P005 | Maize | nucleus | 28.31 | 29.43 |
| VIT_04s0008g05130.t01 | Wine grape | extracellular, golgi | 16.51 | 28.83 |
| HORVU4Hr1G004280.15 | Barley | nucleus, plastid | 34.34 | 28.39 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 13.5 | 19.66 |
| VIT_04s0008g03670.t01 | Wine grape | plastid | 14.29 | 16.12 |
Protein Annotations
| ArrayExpress:VIT_05s0020g03880 | EMBL:FN595749 | EnsemblPlants:VIT_05s0020g03880.t01 | EnsemblPlantsGene:VIT_05s0020g03880 | InterPro:CRC | InterPro:IPR005172 |
| InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 | PFAM:PF03638 | PFscan:PS51634 |
| ProteinID:CCB50450 | ProteinID:CCB50450.1 | SEG:seg | SMART:SM01114 | TIGR:TC54114 | TIGR:TC69316 |
| UniParc:UPI000210A70D | UniProt:F6HDS9 | MapMan:15.5.9 | : | : | : |
Description
No Description!
Coordinates
chr5:+:5537423..5545199
Molecular Weight (calculated)
83271.4 Da
IEP (calculated)
6.549
GRAVY (calculated)
-0.677
Length
763 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTPERNQIA APISKFEDSP VFNFINSLSP IKPVKSAHIA QTFNSLSFVS LPSIFTSPHV SSHKESRFLR RHNFSDPSKP EFSSVNGNKV STNEEVMDAD
101: QLCGNSGKPL EDFDPRSSIG KASFERNNGH SELAIELPQT LKYGCGSPDC DPTPCGGMCQ IEQKKEEAGC DWESLISDAA DLLIFDSPDD TRAFKGLIQK
201: SLDPGTSVCA SLGSQFSQDD VSDLQKKQFV GSDDSGEHET DDPSTQPEEA SKLNGMDQKQ ENLANTSFKD CMGSNASGEM DNEGGTSIPV PSKTLSNLHR
301: GMRRRCLVFE MAGVRRKNMD DGSNCSSSML SQSDGTFVPN DKQLVPLKPG NDSSRRILPG IGLHLNALAT TSKDYNIVKH ETLTSGRQLI SVPSSSGSYL
401: STIEGQEPVN KSLALNSSDR ETDPAENGFQ ALEDASQASA YAISEELNQS SPKKKRRRLE HGGETEGCKR CNCKKSKCLK LYCECFAAGV YCVEPCSCQE
501: CFNKPIHEDT VLATRKQIES RNPLAFAPKV IRSSDSLPEV GDEPSKTPAS ARHKRGCNCK KSSCLKKYCE CYQGGVGCSI NCRCEGCKNA FGRKDGSALI
601: GMEAELEEET ETLEKSVVDK NLQKSIVQND EEYLDSALPV TPLRTCRQPS QLSFPSKTKL PRSSFLTIGS SSGLHTSQIF GKPNFPQPQS KFEKKFQTIP
701: EDEMPEILRG NCSPTSSSIK TASPNSKRVS PPHCDFGSSP SRRSGRKLIL QSIPSFPSLT PQH
101: QLCGNSGKPL EDFDPRSSIG KASFERNNGH SELAIELPQT LKYGCGSPDC DPTPCGGMCQ IEQKKEEAGC DWESLISDAA DLLIFDSPDD TRAFKGLIQK
201: SLDPGTSVCA SLGSQFSQDD VSDLQKKQFV GSDDSGEHET DDPSTQPEEA SKLNGMDQKQ ENLANTSFKD CMGSNASGEM DNEGGTSIPV PSKTLSNLHR
301: GMRRRCLVFE MAGVRRKNMD DGSNCSSSML SQSDGTFVPN DKQLVPLKPG NDSSRRILPG IGLHLNALAT TSKDYNIVKH ETLTSGRQLI SVPSSSGSYL
401: STIEGQEPVN KSLALNSSDR ETDPAENGFQ ALEDASQASA YAISEELNQS SPKKKRRRLE HGGETEGCKR CNCKKSKCLK LYCECFAAGV YCVEPCSCQE
501: CFNKPIHEDT VLATRKQIES RNPLAFAPKV IRSSDSLPEV GDEPSKTPAS ARHKRGCNCK KSSCLKKYCE CYQGGVGCSI NCRCEGCKNA FGRKDGSALI
601: GMEAELEEET ETLEKSVVDK NLQKSIVQND EEYLDSALPV TPLRTCRQPS QLSFPSKTKL PRSSFLTIGS SSGLHTSQIF GKPNFPQPQS KFEKKFQTIP
701: EDEMPEILRG NCSPTSSSIK TASPNSKRVS PPHCDFGSSP SRRSGRKLIL QSIPSFPSLT PQH
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.