Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00620 | Soybean | cytosol | 9.84 | 39.81 |
| VIT_09s0002g06020.t01 | Wine grape | nucleus | 24.49 | 32.82 |
| GSMUA_Achr2P17070_001 | Banana | nucleus | 36.16 | 25.36 |
| KRH05122 | Soybean | nucleus, plastid | 41.88 | 20.24 |
| KRH39836 | Soybean | nucleus, plastid | 39.82 | 19.86 |
| PGSC0003DMT400059571 | Potato | nucleus, plastid | 38.44 | 18.86 |
| Solyc08g067150.2.1 | Tomato | nucleus | 41.88 | 18.52 |
| VIT_05s0020g03880.t01 | Wine grape | nucleus | 28.83 | 16.51 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 19.45 | 16.22 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 28.83 | 15.63 |
| VIT_04s0008g03670.t01 | Wine grape | plastid | 18.08 | 11.69 |
Protein Annotations
| ArrayExpress:VIT_04s0008g05130 | EMBL:FN595231 | EnsemblPlants:VIT_04s0008g05130.t01 | EnsemblPlantsGene:VIT_04s0008g05130 | InterPro:CRC | InterPro:IPR005172 |
| InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF34 | PFAM:PF03638 | PFscan:PS51634 |
| ProteinID:CCB46782 | ProteinID:CCB46782.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM01114 | UniParc:UPI00021089DD |
| UniProt:F6H304 | MapMan:15.5.9 | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:4596157..4599280
Molecular Weight (calculated)
47945.3 Da
IEP (calculated)
7.734
GRAVY (calculated)
-0.613
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MHIIFVNLCK VVLSRYCDCF AAGIYCAEGC ACVGCFNRAE YDDRVLETRK QIESRNPLAF APKIVPPVNG SPINSGEDGR STPSSARHKR GCNCKKSMCL
101: KKYCECYQAN VGCSAGCRCE GCKNVYGRKE EYGAFKEMMS RRANDDRLES SFDKKLEMVA ARSDFLRPEL CNPHNMTPMT PSFQCSDHGN DAANFQIPSR
201: RYAQSPESDF SILSSYGKSP VSPKNSDSHN ILPEPGKEIW DMACYEHEFE YGNAEKVDQF TPGCDRLSDV CHFTSLPSSL PTTAMNPSAS SKTSGLTNVS
301: RGQLCPGSDH LVSGGSLRWR SSPIPPSTQL GETKIFQGLE SDNELYDILE DDTPTILKDA STPTKAVKAS SPKQKRVSPP KIQSHERGSS SSLAILKSGR
401: KFILQAVPSF PPLTPCIDTK SSSHQNSSDP QDSSSNK
101: KKYCECYQAN VGCSAGCRCE GCKNVYGRKE EYGAFKEMMS RRANDDRLES SFDKKLEMVA ARSDFLRPEL CNPHNMTPMT PSFQCSDHGN DAANFQIPSR
201: RYAQSPESDF SILSSYGKSP VSPKNSDSHN ILPEPGKEIW DMACYEHEFE YGNAEKVDQF TPGCDRLSDV CHFTSLPSSL PTTAMNPSAS SKTSGLTNVS
301: RGQLCPGSDH LVSGGSLRWR SSPIPPSTQL GETKIFQGLE SDNELYDILE DDTPTILKDA STPTKAVKAS SPKQKRVSPP KIQSHERGSS SSLAILKSGR
401: KFILQAVPSF PPLTPCIDTK SSSHQNSSDP QDSSSNK
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.