Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g067150.2.1 | Tomato | nucleus | 91.47 | 82.49 |
| KRH00620 | Soybean | cytosol | 5.39 | 44.44 |
| VIT_04s0008g05130.t01 | Wine grape | extracellular, golgi | 18.86 | 38.44 |
| GSMUA_Achr2P17070_001 | Banana | nucleus | 19.53 | 27.93 |
| KRH05122 | Soybean | nucleus, plastid | 28.28 | 27.88 |
| KRH39836 | Soybean | nucleus, plastid | 26.04 | 26.48 |
| PGSC0003DMT400082098 | Potato | nucleus | 21.77 | 23.49 |
| PGSC0003DMT400000824 | Potato | plastid | 9.09 | 16.6 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400059571 | EnsemblPlantsGene:PGSC0003DMG400023147 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF21 | PFAM:PF03638 | PFscan:PS51634 | PGSC:PGSC0003DMG400023147 | SEG:seg |
| SMART:SM01114 | UniParc:UPI000294D811 | UniProt:M1C4F7 | MapMan:15.5.9 | : | : |
Description
Cysteine-rich polycomb [Source:PGSC_GENE;Acc:PGSC0003DMG400023147]
Coordinates
chr8:+:40226453..40233500
Molecular Weight (calculated)
95938.2 Da
IEP (calculated)
6.660
GRAVY (calculated)
-0.522
Length
891 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSPEPSSKI TATINNTLSS DPVPAQDSPV FNYISNLSPI QPVKGAPIVQ DFSGLNSPPL LLTSPRINTH SRSSLLKRSQ FPKLSTEVFS GKNEDYNNAI
101: TDSDGTGVVF SPLRSGLSPF VQKVSDNNIS VHEQSGTPIR CVEFLVDVSN SESGNPSNSN NTSPEVADSI PQSPNSAEDS KVSVVNIASK DERKDEIPED
201: AARVVVEQAE EDNKGKFPSN QKYTGVYSTS DPDLPSHGFC TKIVPSLAAH SSLHYHYGDQ QMAQLSTAGH TMLDEASNIP IKSLETAHDC RDDSDKIRMS
301: IAPDEGIALH DSQTKAGQHQ SGISRRCLQF EDAQQKMAPA SSSSQNASGI VSCSIQPVSP AVIEVVEPVS SNRSSKLTQL VSSSVNSESL NVKVSKPSGI
401: GLHLNSIVNG MEAGSGVTVS VKSIQRGNLS IRGKKLTSMM SCHPSKNLKN CLISSNVVGS NLTIGDNDGK HESYGSDAEI VAASLSLNNA KPLNDTVLLK
501: PTEHTPSNKR KKKTLDGNDG DGCKRCNCKK TKCLKLYCDC FAAGVYCVDS CTCQGCFNRP EYEDTVLDVR QQIQSRNPLA FAPKIVQHST SSPANILGEG
601: GASFTPSSAR HKRGCNCKKS MCLKKYCECY QANVGCSSGC RCEGCKNVFG PKEECGIDLV NKHCITERLE RSVEEEVEMV TATTAYGLSP GSPRSSNNHD
701: IHQETTGDML DLVTFDHELN YGNAKLANEI SPGFHVTGNM DDILALPKSQ DWASNSGGQL IPQTVHFQST DPLSWHNSPM TQFDRSGMNT LELLDSDKKP
801: YVMEDDTPEI LKASSILQIG VKVNSPNKKR VSPPYRHLNE IGSSSSGGGL KTGRKFILRA VPSFPPLSPC IQSKDVAVHS TNNSEKDSSS K
101: TDSDGTGVVF SPLRSGLSPF VQKVSDNNIS VHEQSGTPIR CVEFLVDVSN SESGNPSNSN NTSPEVADSI PQSPNSAEDS KVSVVNIASK DERKDEIPED
201: AARVVVEQAE EDNKGKFPSN QKYTGVYSTS DPDLPSHGFC TKIVPSLAAH SSLHYHYGDQ QMAQLSTAGH TMLDEASNIP IKSLETAHDC RDDSDKIRMS
301: IAPDEGIALH DSQTKAGQHQ SGISRRCLQF EDAQQKMAPA SSSSQNASGI VSCSIQPVSP AVIEVVEPVS SNRSSKLTQL VSSSVNSESL NVKVSKPSGI
401: GLHLNSIVNG MEAGSGVTVS VKSIQRGNLS IRGKKLTSMM SCHPSKNLKN CLISSNVVGS NLTIGDNDGK HESYGSDAEI VAASLSLNNA KPLNDTVLLK
501: PTEHTPSNKR KKKTLDGNDG DGCKRCNCKK TKCLKLYCDC FAAGVYCVDS CTCQGCFNRP EYEDTVLDVR QQIQSRNPLA FAPKIVQHST SSPANILGEG
601: GASFTPSSAR HKRGCNCKKS MCLKKYCECY QANVGCSSGC RCEGCKNVFG PKEECGIDLV NKHCITERLE RSVEEEVEMV TATTAYGLSP GSPRSSNNHD
701: IHQETTGDML DLVTFDHELN YGNAKLANEI SPGFHVTGNM DDILALPKSQ DWASNSGGQL IPQTVHFQST DPLSWHNSPM TQFDRSGMNT LELLDSDKKP
801: YVMEDDTPEI LKASSILQIG VKVNSPNKKR VSPPYRHLNE IGSSSSGGGL KTGRKFILRA VPSFPPLSPC IQSKDVAVHS TNNSEKDSSS K
001: MDKSQKNPTS QIGTSTPKSK FEDSPVFNYI SNLSPIESVK SISTAQTFSS LSFTSPPPVF TSPHVISHRE SRFFRCHNSV DRSKHLESLD GSAVKGEVVV
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
101: PLVEDLNKEA SLEDEEETSV ETSSELPQIM KFDSQTSEHS DSPCTEDVVI EASSDPPRGD NGSSSEDVTM GLQNMLVVRE GNDTPGCGRL ISDATELLVF
201: RSPNDSEAFR CLVDKISSSE RRFCAGVKST KRPDINKDIP ANGSSNENQP LAVLPTNESV FNLHRGGMRR RCLDFEMPGK RKKDIVDDQQ SVCDNNVAGE
301: SSSSCVVPGI GLHLNAVAMS AKDSNISVIH GYSISGEIQK SFSGSTTPIQ SQDTVQETSD QAENEPVEEV PKALVFPELN LGSLKKKMRK SEQAGEGESC
401: KRCNCKKSKC LKLYCECFAA GVYCIEPCSC IDCFNKPIHE ETVLATRKQI ESRNPLAFAP KVIRNADSIM EASDDASKTP ASARHKRGCN CKKSNCMKKY
501: CECYQGGVGC SMNCRCEGCT NVFGRKDGSL LVIMESKLEE NQETYEKRIA KIQHNVEVSK EVEQNPSSDQ PSTPLPPYRH LVVHQPFLSK NRLPPTQFFL
601: GTGSSSFRKP NSDLAQSQNE KKPLETVTED KTEIMPEILL NSPIANIKAI SPNSKRVSPP QPGSSESGSI LRRRGNGRKL ILRSIPAFPS LNPNQ
Arabidopsis Description
TSO1CRC domain-containing protein TSO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.