Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400059571 | Potato | nucleus, plastid | 82.49 | 91.47 |
| KRH00620 | Soybean | cytosol | 5.26 | 48.15 |
| VIT_04s0008g05130.t01 | Wine grape | extracellular, golgi | 18.52 | 41.88 |
| GSMUA_Achr2P17070_001 | Banana | nucleus | 19.64 | 31.14 |
| KRH05122 | Soybean | nucleus, plastid | 27.53 | 30.09 |
| KRH39836 | Soybean | nucleus, plastid | 25.61 | 28.88 |
| Solyc09g082500.2.1 | Tomato | nucleus | 21.05 | 25.09 |
| Solyc12g007180.1.1 | Tomato | nucleus | 9.01 | 17.87 |
| Solyc07g020710.2.1 | Tomato | nucleus | 8.81 | 15.26 |
Protein Annotations
| EnsemblPlants:Solyc08g067150.2.1 | EnsemblPlantsGene:Solyc08g067150.2 | InterPro:CRC | InterPro:IPR005172 | InterPro:Lin-54_fam | InterPro:Tesmin/TSO1-like_CXC |
| PANTHER:PTHR12446 | PANTHER:PTHR12446:SF34 | PFAM:PF03638 | PFscan:PS51634 | SEG:seg | SMART:SM01114 |
| UniParc:UPI000276C0A1 | UniProt:K4CLU1 | MapMan:15.5.9 | : | : | : |
Description
No Description!
Coordinates
chr8:+:56073994..56082770
Molecular Weight (calculated)
106499.0 Da
IEP (calculated)
6.567
GRAVY (calculated)
-0.591
Length
988 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSPEPSSKI NATINTTLSS DPGPAQDSPV FNYISNLSPI QPVKGAPIVQ DFSGLNSPPL LLTSPRINTH SRSSLLKRSQ FPKLSTEVFS GKNEDYNTAI
101: TDSDGTGVFI SPLGSGLSPF VQKVSDNNIS VHEQSGTPIS CVDEFLVDVS NSESGDSSNS NNKSPKVADS IPQPPDSAED SKVPVVSIPS KDERKDEIPE
201: DAARVVVEQA EEDNKGKSPS NQKYTGVYST SNPDLPSLGL CAKIVPGLDA HSSLHNHYGD RQMAQLSRAG HTVLDEASNI PIKSLETAGD CRDDNDKIST
301: MSIVPDDGIL QHDSQTKASQ HQSGISRRCL QFEDAQQKMA PASSSSQNAS GIVSCSIQPV SPAVIEVVEP VSSNRSSTTS NRRLTQLVSS SVNSESLNVK
401: VSKPSGIGLH LNSIVNGMEA GSGVTVSVKS TQRGNLSIRG KKLTSMMSCH PSKNLKNCLI SANVVGSNLT SDNDGIHESY RSDAESAAAS LSHNNAKLLN
501: DTVLLKPTEH TPSNKRKLNS EHIDSNMDYN QSSPQKKRKK ISDGNDGDGC KRCNCKKTKC LKLYCDCFAA GVYCVDSCTC QGCFNRPEYE DTVLDVRQQI
601: QSRNPLAFAP KIVQHSTNSP ANILGEGVAS FTPSSARHKR GCNCKKSMCL KKYCECYQAN VGCSSGCRCE GCKNVFGPKE EYGIDLVNKH CITESLERSV
701: EEEVEMVTAT SGLLQSGPIN QCNSTPLTPS FRRSNNVDAS KSWFTSGRYL SSPESGQADT APYGLSPGSP RSSNNHDTHQ ETIGDMLDLV TFDHELSYGN
801: AKLANEISPG FNVTGNMDDI LALPKSQDWA SNSGGQLIPQ TVHFQSTDPL SWRNSPMTHM TQFDGSGMNA LELLDSDKKP YVLEDDTPEI LKDSSIPQIG
901: VKVNSPNKKR VSPPYRHLNE IGSSSSGGGL KTGRKFILRA VPSFPPLSPC IQSKNVAAHS TDNSEKDTNM CYQKSEITDC NKLFINTK
101: TDSDGTGVFI SPLGSGLSPF VQKVSDNNIS VHEQSGTPIS CVDEFLVDVS NSESGDSSNS NNKSPKVADS IPQPPDSAED SKVPVVSIPS KDERKDEIPE
201: DAARVVVEQA EEDNKGKSPS NQKYTGVYST SNPDLPSLGL CAKIVPGLDA HSSLHNHYGD RQMAQLSRAG HTVLDEASNI PIKSLETAGD CRDDNDKIST
301: MSIVPDDGIL QHDSQTKASQ HQSGISRRCL QFEDAQQKMA PASSSSQNAS GIVSCSIQPV SPAVIEVVEP VSSNRSSTTS NRRLTQLVSS SVNSESLNVK
401: VSKPSGIGLH LNSIVNGMEA GSGVTVSVKS TQRGNLSIRG KKLTSMMSCH PSKNLKNCLI SANVVGSNLT SDNDGIHESY RSDAESAAAS LSHNNAKLLN
501: DTVLLKPTEH TPSNKRKLNS EHIDSNMDYN QSSPQKKRKK ISDGNDGDGC KRCNCKKTKC LKLYCDCFAA GVYCVDSCTC QGCFNRPEYE DTVLDVRQQI
601: QSRNPLAFAP KIVQHSTNSP ANILGEGVAS FTPSSARHKR GCNCKKSMCL KKYCECYQAN VGCSSGCRCE GCKNVFGPKE EYGIDLVNKH CITESLERSV
701: EEEVEMVTAT SGLLQSGPIN QCNSTPLTPS FRRSNNVDAS KSWFTSGRYL SSPESGQADT APYGLSPGSP RSSNNHDTHQ ETIGDMLDLV TFDHELSYGN
801: AKLANEISPG FNVTGNMDDI LALPKSQDWA SNSGGQLIPQ TVHFQSTDPL SWRNSPMTHM TQFDGSGMNA LELLDSDKKP YVLEDDTPEI LKDSSIPQIG
901: VKVNSPNKKR VSPPYRHLNE IGSSSSGGGL KTGRKFILRA VPSFPPLSPC IQSKNVAAHS TDNSEKDTNM CYQKSEITDC NKLFINTK
001: MDTPQKSITQ IGTPISKSRF EDSPVFNYIN SLSPIRPVRS IPNPNQFSSL NFTSPPSVFT SPHLTSSHKE SRFFKTHNSS SSDPTNSVES QEDESTSHEE
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
Arabidopsis Description
TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.