Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- golgi 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0008g05130.t01 | Wine grape | extracellular, golgi | 32.82 | 24.49 |
| VIT_11s0016g03680.t01 | Wine grape | nucleus, plastid | 24.54 | 15.27 |
| VIT_05s0020g03880.t01 | Wine grape | nucleus | 31.6 | 13.5 |
| VIT_14s0030g01800.t01 | Wine grape | nucleus | 30.67 | 12.41 |
| VIT_04s0008g03670.t01 | Wine grape | plastid | 21.78 | 10.5 |
Protein Annotations
| EntrezGene:100855293 | wikigene:100855293 | MapMan:15.5.9 | ProteinID:CBI36260 | ProteinID:CBI36260.3 | InterPro:CRC |
| UniProt:D7U0W4 | EMBL:FN596494 | InterPro:IPR005172 | EntrezGene:LOC100855293 | wikigene:LOC100855293 | InterPro:Lin-54_fam |
| PFAM:PF03638 | PFscan:PS51634 | PANTHER:PTHR12446 | PANTHER:PTHR12446:SF34 | SMART:SM01114 | InterPro:Tesmin/TSO1-like_CXC |
| UniParc:UPI0001BE4A2D | ArrayExpress:VIT_09s0002g06020 | EnsemblPlantsGene:VIT_09s0002g06020 | EnsemblPlants:VIT_09s0002g06020.t01 | RefSeq:XP_003632803 | RefSeq:XP_003632803.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:5833090..5835552
Molecular Weight (calculated)
35794.5 Da
IEP (calculated)
7.198
GRAVY (calculated)
-0.787
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRKTATHTT ESDRKHCNCK RTQCLKLYCD CLAAGVYCTD SCACSNCLNK SENEGVVQII REKIESRDPL AFAPRIVNPD TDTTDNVLQE DGNWTTPSSA
101: RHKRGCNCKK SMCQKKYCEC YQVYISVDLN RRAERWGVQS HGELNMGGAD QFSPEWEGIT DINQITPLSH PHSGAGASSA SPNPRDFPEV LHAELYRGNN
201: SQTSAGALHW SSSSNTLVPL RHGNEAPQEL SSDSAQHALT KDDDTPKILS SSPNGPMQAC SSNQKCVSPP QIQLKDTSLR PSPSLTNEQT IIRLGTPSVR
301: PFSWCSNSKD GIPQIKSHPN DSTSNQ
101: RHKRGCNCKK SMCQKKYCEC YQVYISVDLN RRAERWGVQS HGELNMGGAD QFSPEWEGIT DINQITPLSH PHSGAGASSA SPNPRDFPEV LHAELYRGNN
201: SQTSAGALHW SSSSNTLVPL RHGNEAPQEL SSDSAQHALT KDDDTPKILS SSPNGPMQAC SSNQKCVSPP QIQLKDTSLR PSPSLTNEQT IIRLGTPSVR
301: PFSWCSNSKD GIPQIKSHPN DSTSNQ
001: MDTPQKSITQ IGTPISKSRF EDSPVFNYIN SLSPIRPVRS IPNPNQFSSL NFTSPPSVFT SPHLTSSHKE SRFFKTHNSS SSDPTNSVES QEDESTSHEE
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
101: VPAEGEDTKG LNIDDCMREE ASVETNLDDS VASPCGGNTT DLSLVPYAPT RGEDGSCEDN GMELQKMHDN VQGKTETPDW ESLIADASEL LIFDSPDASE
201: AFRCFMMQRA SNSEARFRNG VEKQTMQHDS NKEPESANAI PYEAVSLLHR GIRRRCLDFE MPGNKQTSSE NNTAACESSS RCVVPSIGLH LNAILMSSKD
301: CKTNVTQDYS CSANIQVGLQ RSISTLQDSL DQTENEIRED ADQDVPVEPA LQELNLSSPK KKRVKLDSGE GESCKRCNCK KSKCLKLYCE CFAAGVYCIE
401: PCSCIDCFNK PIHEDVVLAT RKQIESRNPL AFAPKVIRNS DSVQETGDDA SKTPASARHK RGCNCKKSNC LKKYCECYQG GVGCSINCRC EGCKNAFGRK
501: DGSSIDMEAE QEEENETSEK SRTAKSQQNT EVLMRKDMSS ALPTTPTPIY RPELVQLPFS SSKNRMPPPQ SLLGGGSSSG IFNSQYLRKP DISLSQSRIE
601: KSFETVAVDG AEQMPEILIH SPIPNIKSVS PNGKRVSPPH MESSSSGSIL GRRNGGRKLI LQSIPSFPSL TPQH
Arabidopsis Description
TCX2Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.