Factsheet for Os08t0369600-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0363900-00	Rice	cytosol	90.51	94.08
HORVU2Hr1G021360.2	Barley	plastid	52.3	31.69
TraesCS2A01G122300.2	Wheat	plastid	50.41	31.63
TraesCS2B01G144400.2	Wheat	plastid	49.86	31.24
TraesCS2D01G125000.1	Wheat	plastid	49.59	31.12
Os03t0638300-01	Rice	cytosol	9.21	30.09
Os06t0332700-00	Rice	nucleus	24.12	29.37
AT3G16160.1	Thale cress	nucleus	20.6	20.65
CDY19795	Canola	nucleus	24.93	20.22
Bra036551.1-P	Field mustard	nucleus	24.93	20.18
CDX80536	Canola	nucleus	27.1	19.27
CDY28377	Canola	nucleus	17.07	19.21
Bra009859.1-P	Field mustard	nucleus	26.02	18.86
CDX88196	Canola	nucleus	26.02	18.82
Bra021165.1-P	Field mustard	nucleus	16.53	18.71
CDY05340	Canola	nucleus	24.12	18.62
CDY65712	Canola	nucleus	23.04	18.56
CDY20184	Canola	cytosol	17.07	18.53
Os01t0761100-01	Rice	cytosol, nucleus, plastid	29.81	17.77
AT5G25790.2	Thale cress	nucleus	23.85	17.46
Os02t0274600-00	Rice	cytosol, nucleus	19.51	16.48
Os05t0509400-01	Rice	cytosol, nucleus, plasma membrane, plastid	13.82	13.64
Os12t0605300-01	Rice	nucleus	14.63	13.27
Os07t0176200-01	Rice	nucleus	20.87	9.85
Os12t0605500-01	Rice	nucleus	19.24	9.34

Protein Annotations

EnsemblPlants:Os08t0369600-01	EnsemblPlantsGene:Os08g0369600	InterPro:CRC	InterPro:IPR005172	InterPro:Lin-54_fam	InterPro:Tesmin/TSO1-like_CXC
PANTHER:PTHR12446	PANTHER:PTHR12446:SF45	PFAM:PF03638	PFscan:PS51634	ProteinID:BAD03490.1	ProteinID:BAD03541.1
ProteinID:BAF23571.1	ProteinID:BAT05162.1	SEG:seg	SMART:SM01114	UniParc:UPI0000226127	UniProt:Q6Z253
MapMan:15.5.9	:	:	:	:	:

Description

Similar to Cysteine-rich polycomb-like protein. (Os08t0369600-01)

Coordinates

chr8:-:17217593..17221237

Molecular Weight (calculated)

40431.8 Da

IEP (calculated)

8.744

GRAVY (calculated)

-0.342

Length

369 amino acids

Sequence
(BLAST)

001: MEKPLQLCPG SVKIDFASAS YAGKADIAAT AAALLHALGP PRTPPCYQLP LAKVNSSLPL WPPVICPSTF AQKRPMSLPS PPPAKKLQVQ QSSSMLPQDF
101: PKLEVLPVEK PTKLQVRRSP QHVSPALKQD SPKMERPLLP RPATFIDVML SSQKPSSEMW SETKDVTLTR KTNCSCKYSK CLKLYCECFE KGRYCIGCNC
201: TNCCNNVNHE NARQDAINVA LERNPAAFMP KVLNSTAHNC ESKAAEGDIV GKHTKGCKCK RTECLKKYCE CFKASVFCSE NCRCTGCKNY KSNADRISQK
301: NTVHAHHVQN PASSGMVGQS VIIFHAAEND SSLSLAASVS DHSINNNTSH VILLQHTFQI CHGPCFLIG

Best Arabidopsis Sequence Match ( AT4G29000.1 )
(BLAST)

001: MGEDGGGGEF PPKKDGVEEG FPTKKPARQL DFTGGSDEHS LSKPAAPTVV ATSVKPIISS SVPSTIRPGM TIAIGQVTQV RPTLPMATTM SNPPSQSQIV
101: NAPIRHPIPE SPKARGPRPN VEGRDGTPQK KKQCNCKHSR CLKLYCECFA SGTYCDGCNC VNCFNNVDNE PARREAVEAT LERNPFAFRP KIASSPHGGR
201: DKREDIGEVV LLGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCLDCK NFEGSEERQA LFHGEHSNHM AYLQQAANAA ITGAVGSSGF APSPAPKRRK
301: GQEILFNQAI KDSSRLSHFP QVNNGRTGGP TSGTSPSPVS RAGGNASSVP SKFVYRSLLA DIIQPHDVRA LCSVLVTVAG EAAKTSTDKR NEIENRVDDQ
401: TETSLASSAQ DQPQGNNNAA DVEMVATDHN QADKSGPEES NSDGVDASKV TPLSPATLAL MCDEQDTIFM VAAPSPNGSV DPNGCRPNSQ GQSEIYAEQE
501: RLVLTKFRDC LNRLISYAEI KESKCLSLAR MHIQPPAIAT VKTENGIQQQ VPIVNGASRT NCQPTLNKPQ PMQLMNTTSA APATATNTQH LQKPPALSEK
601: KDP

Arabidopsis Description

TCX5Protein tesmin/TSO1-like CXC 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZD1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.