Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G495000.1 | Wheat | golgi | 97.24 | 97.24 |
| KXG37247 | Sorghum | plastid | 89.37 | 88.33 |
| Os03t0822200-01 | Rice | extracellular, plasma membrane | 88.58 | 87.55 |
| Zm00001d034665_P001 | Maize | plastid | 88.19 | 87.16 |
| TraesCS5B01G494600.1 | Wheat | plastid | 97.64 | 85.52 |
| TraesCS1A01G030100.1 | Wheat | plastid | 75.98 | 64.55 |
| TraesCS7A01G338800.1 | Wheat | mitochondrion, plastid | 27.17 | 24.21 |
| TraesCS4A01G189000.1 | Wheat | plastid | 30.71 | 23.85 |
| TraesCS5A01G269800.1 | Wheat | cytosol, extracellular, plastid | 25.59 | 10.05 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G481400.1 | EnsemblPlantsGene:TraesCS5A01G481400 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR14194 |
| PANTHER:PTHR14194:SF61 | PFAM:PF13460 | SEG:seg | SUPFAM:SSF51735 | TIGR:cd05243 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5A:-:653850653..653853145
Molecular Weight (calculated)
27533.7 Da
IEP (calculated)
7.657
GRAVY (calculated)
-0.426
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPRPTVLV TGAGGRTGQI VFNKLRERSD QFAARGLVRS EESKHKIGGA DDVYVADIRE ADHLAPAVQG ADALIILTSA SPKMKPGFDP TKGGRPEFYY
101: EDGAYPEQVD WIGQKNQIDA AKAAGVKHIV LVGSMGGTNP NHPLNNLGNG NILVWKRKSE QYLADSGVPY TIIRPGGLQD KDRGVRELIV GKDDELLQTD
201: TKAIPRADVA EVCVQALQYE EVKFKAFDLA SKPEGEGTPT KDFKALFSKV TARF
101: EDGAYPEQVD WIGQKNQIDA AKAAGVKHIV LVGSMGGTNP NHPLNNLGNG NILVWKRKSE QYLADSGVPY TIIRPGGLQD KDRGVRELIV GKDDELLQTD
201: TKAIPRADVA EVCVQALQYE EVKFKAFDLA SKPEGEGTPT KDFKALFSKV TARF
001: MAMMTTTTTT FFHPLLPANT YKSGAVASSF VSVPRSSSLQ FRSLVSDSTS ICGPSKFTGK NRRVSVTVSA AATTEPLTVL VTGAGGRTGQ IVYKKLKERS
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF
Arabidopsis Description
Uncharacterized protein At2g37660, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80934]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.