Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
plastid: 22065420 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37247 | Sorghum | plastid | 96.5 | 96.5 |
| Os03t0822200-01 | Rice | extracellular, plasma membrane | 89.88 | 89.88 |
| TraesCS5D01G495000.1 | Wheat | golgi | 87.55 | 88.58 |
| TraesCS5A01G481400.1 | Wheat | mitochondrion, plastid | 87.16 | 88.19 |
| TraesCS5B01G494600.1 | Wheat | plastid | 87.16 | 77.24 |
| Zm00001d035672_P001 | Maize | peroxisome | 35.02 | 73.17 |
| Zm00001d011069_P001 | Maize | plastid | 77.43 | 66.78 |
| Zm00001d046769_P001 | Maize | cytosol | 21.01 | 28.27 |
| Zm00001d038694_P001 | Maize | cytosol | 11.28 | 26.85 |
| Zm00001d040326_P001 | Maize | plastid | 22.57 | 25.44 |
| Zm00001d031799_P001 | Maize | plastid | 27.24 | 24.73 |
| Zm00001d047463_P001 | Maize | plastid | 30.35 | 23.21 |
| Zm00001d029200_P001 | Maize | plastid | 30.35 | 23.15 |
| Zm00001d037076_P001 | Maize | cytosol | 10.89 | 22.76 |
| Zm00001d007921_P001 | Maize | plastid | 24.12 | 19.68 |
| Zm00001d032783_P001 | Maize | plastid | 20.62 | 15.1 |
Protein Annotations
| EnsemblPlants:Zm00001d034665_P001 | EnsemblPlants:Zm00001d034665_T001 | EnsemblPlantsGene:Zm00001d034665 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf |
| PANTHER:PTHR14194 | PANTHER:PTHR14194:SF61 | PFAM:PF13460 | ProteinID:ONM10954.1 | SUPFAM:SSF51735 | UniParc:UPI0002214469 |
| UniProt:A0A1D6L9Y9 | MapMan:35.1 | : | : | : | : |
Description
NAD-dependent epimerase/dehydratase
Coordinates
chr1:-:299210476..299212684
Molecular Weight (calculated)
27757.1 Da
IEP (calculated)
7.498
GRAVY (calculated)
-0.370
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSATSRPT VLVTGAGGRT GQIVYNKLKE RSEQFVARGL VRTEESKQKI GAAGDVYVAD IRDADRLAPA VQGVDALIIL TSAAPKMKPG FDPSKGGRPE
101: FYYEDGMYPE QVDWVGQKNQ IDAAKAAGVK HIVLVGSMGG TNPNHPLNSM GNGNILVWKR KAEQYLADSG IPYTIIRPGG LQDKDGGVRE LLVGKDDELL
201: QTDTKSIPRA DVAEVCVQAL QYEEAKFKAF DLASKPEGVG TPTKDFRALF SQITARF
101: FYYEDGMYPE QVDWVGQKNQ IDAAKAAGVK HIVLVGSMGG TNPNHPLNSM GNGNILVWKR KAEQYLADSG IPYTIIRPGG LQDKDGGVRE LLVGKDDELL
201: QTDTKSIPRA DVAEVCVQAL QYEEAKFKAF DLASKPEGVG TPTKDFRALF SQITARF
001: MAMMTTTTTT FFHPLLPANT YKSGAVASSF VSVPRSSSLQ FRSLVSDSTS ICGPSKFTGK NRRVSVTVSA AATTEPLTVL VTGAGGRTGQ IVYKKLKERS
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF
Arabidopsis Description
Uncharacterized protein At2g37660, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80934]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.