Factsheet for Zm00001d007921_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97808	Sorghum	plastid	81.9	65.32
Os10t0100300-01	Rice	nucleus, plastid	66.98	42.45
GSMUA_Achr8P04880_001	Banana	endoplasmic reticulum, vacuole	60.63	37.82
KRH24514	Soybean	plastid	48.57	36.43
TraesCS5D01G277900.1	Wheat	plastid	62.86	35.29
KRH29515	Soybean	plastid	21.59	35.05
TraesCS5B01G270200.1	Wheat	plastid	63.17	35.04
KRH24515	Soybean	plastid	58.41	34.85
VIT_03s0063g02020.t01	Wine grape	plastid	57.78	34.4
KRH29518	Soybean	vacuole	57.78	32.67
Zm00001d031799_P001	Maize	plastid	27.94	31.1
TraesCS5A01G269800.1	Wheat	cytosol, extracellular, plastid	62.86	30.6
HORVU5Hr1G074000.3	Barley	mitochondrion	62.86	28.91
AT3G18890.1	Thale cress	plastid	58.1	28.55
CDX92286	Canola	plastid	57.14	28.04
Bra022369.1-P	Field mustard	plastid	56.83	27.84
CDX99298	Canola	plastid	56.51	27.77
Zm00001d038694_P001	Maize	cytosol	8.89	25.93
PGSC0003DMT400021326	Potato	cytosol, peroxisome, plastid	55.87	25.77
Solyc10g051110.1.1	Tomato	plastid	56.83	24.39
Zm00001d034665_P001	Maize	plastid	19.68	24.12
Zm00001d035672_P001	Maize	peroxisome	9.21	23.58
Zm00001d040326_P001	Maize	plastid	16.19	22.37
Zm00001d046769_P001	Maize	cytosol	13.33	21.99
Zm00001d011069_P001	Maize	plastid	19.05	20.13
Zm00001d029200_P001	Maize	plastid	21.27	19.88
Zm00001d047463_P001	Maize	plastid	20.95	19.64
Zm00001d037076_P001	Maize	cytosol	6.03	15.45
Zm00001d032783_P001	Maize	plastid	15.56	13.96

Protein Annotations

MapMan:1.1.5.2.2.2	EntrezGene:100281300	MapMan:23.1.3.5.3	Gene3D:3.40.50.720	UniProt:B6SU61	EMBL:EU956276
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009536	GO:GO:0009579
GO:GO:0016020	GO:GO:0098807	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM27929.1	PFAM:PF13460
PANTHER:PTHR14194	PANTHER:PTHR14194:SF83	SUPFAM:SSF51735	UniParc:UPI000182ADB4	EnsemblPlantsGene:Zm00001d007921	EnsemblPlants:Zm00001d007921_P001
EnsemblPlants:Zm00001d007921_T001	SEG:seg	:	:	:	:

Description

Tic62 protein

Coordinates

chr2:+:242698020..242699502

Molecular Weight (calculated)

34152.3 Da

IEP (calculated)

9.424

GRAVY (calculated)

-0.070

Length

315 amino acids

Sequence
(BLAST)

001: MDTIVSLSPQ MLRQRQGHQS TASSSSSAWA ITTARIGRHL STASSCSSPR LLIKQRATAA SAPAQKEKEV VFVAGATGRV GSRAVRELMK LGFRVRAAVR
101: NAQRATSLVQ KEKEQQLLEL VECDLEKEPQ EGIVSAIGNA SLVVCSIGAS EKEILDVTGP YRIDYMATSK LVQAATAAKQ VEHFILVTSL GTNKIGFPAF
201: LLNLFWGVLF WKRRAEEALI ASGIPYTIIR PGGMERPTDA YKETHNLVLA PEDTYVGGQV SNLQVAELIG CMATNRSAAY CKTVEAVAEI TAPLLPMEQL
301: LSAIPSKREQ RPADR

Best Arabidopsis Sequence Match ( AT3G18890.1 )
(BLAST)

001: MEGTCFLRGQ PLTTIPSLPS RKGFLLQRWK TNRIVRFSGF KNHSVSGKSR SFDLSLRASG PIRASSVVTE ASPTNLNSKE EDLVFVAGAT GKVGSRTVRE
101: LLKLGFRVRA GVRSAQRAGS LVQSVKEMKL QNTDEGTQPV EKLEIVECDL EKKDSIQPAL GNASVIICCI GASEKEISDI TGPYRIDYLA TKNLVDAATS
201: AKVNNFILVT SLGTNKFGFP AAILNLFWGV LCWKRKAEEA LIESGLNYAI VRPGGMERPT DAYKETHNLT LALDDTLFGG QVSNLQVAEL LACMAKNPQL
301: SFSKIVEVVA ETTAPLTPIE KLLEKIPSKR PYVPPPKASV ATKEVKPVPT KPVTQEPTAP KEDEAPPKEK NVKPRPLSPY ASYEDLKPPT SPIPNSTTSV
401: SPAKSKEVDA TQVPVEANVV PVPDSTSNVP VVEVKQVEEK KERPLSPYAR YENLKPPSSP SPTASSTRKS DSLSPGPTDS DTDKSSTVAK TVTETAVATS
501: VTETSVATSV PETAVATSVT ETAAPATSKM RPLSPYAIYA DLKPPTSPTP ASTGPKEAAS VEDNSELPGG NNDVLKTVDG NLNTIPPSTP EAVPVVSSAI
601: DTSLASGDNT AQPKPRPLSP YTMYADMKPP TSPLPSPVTN H

Arabidopsis Description

TIC62Protein TIC 62, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0U5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.