Skip to main content
crop-pal logo
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 8
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH29518 Soybean vacuole 94.13 89.23
KRH29515 Soybean plastid 29.73 80.93
KRH24514 Soybean plastid 51.89 65.24
VIT_03s0063g02020.t01 Wine grape plastid 61.36 61.25
Zm00001d007921_P001 Maize plastid 34.85 58.41
GSMUA_Achr8P04880_001 Banana endoplasmic reticulum, vacuole 49.43 51.68
Os10t0100300-01 Rice nucleus, plastid 48.3 51.31
EER97808 Sorghum plastid 36.55 48.86
CDX99298 Canola plastid 55.68 45.87
AT3G18890.1 Thale cress plastid 54.73 45.09
CDX92286 Canola plastid 54.55 44.86
PGSC0003DMT400021326 Potato cytosol, peroxisome, plastid 57.58 44.51
Bra022369.1-P Field mustard plastid 54.17 44.48
TraesCS5D01G277900.1 Wheat plastid 46.59 43.85
TraesCS5B01G270200.1 Wheat plastid 46.78 43.49
Solyc10g051110.1.1 Tomato plastid 57.58 41.42
TraesCS5A01G269800.1 Wheat cytosol, extracellular, plastid 46.4 37.87
HORVU5Hr1G074000.3 Barley mitochondrion 46.21 35.62
KRH42344 Soybean plastid 16.48 30.0
KRH58466 Soybean plastid 16.29 29.45
KRG99976 Soybean nucleus 12.12 25.1
KRH07338 Soybean plastid 13.64 21.62
KRH49116 Soybean nucleus 12.88 20.54
KRH66235 Soybean plastid 13.64 20.34
Protein Annotations
EMBL:ACUP02007178EnsemblPlants:KRH24515EnsemblPlantsGene:GLYMA_12G046200EntrezGene:100779056Gene3D:3.40.50.720InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sfPANTHER:PTHR14194PANTHER:PTHR14194:SF83PFAM:PF13460ProteinID:KRH24515ProteinID:KRH24515.1
SEG:segSUPFAM:SSF51735UniParc:UPI000233D49FUniProt:I1LQ66MapMan:1.1.5.2.2.2MapMan:23.1.3.5.3
Description
hypothetical protein
Coordinates
chr12:+:3354093..3359660
Molecular Weight (calculated)
55755.2 Da
IEP (calculated)
7.454
GRAVY (calculated)
-0.277
Length
528 amino acids
Sequence
(BLAST)
001: MEAFSVQSLT ATTIPSSLSR RGATDKPSAT SHVNLSHFMR YPCTTRSTKQ KILCTRAQAS GSTKSSTGSA EGISEKTDSK DDNLVFVAGA TGRVGSRTVR
101: ELIKLGFRVR AGVRSAQRAG ALVQSVEQLK LDGASGGGQA VEKLEIVECD LEKPETIGSA LGDASTVICS IGASEKEVFD ITGPFRIDYQ ATKNLIDAAT
201: VAKVNHFILV TSLGTNKIGF PAAILNLFWG VLVWKRKAEE ALLASGLPYT IVRPGGMERP TDAFKETHNI TLSTEDTLFG GLVSNLQIAE LLAVMAKNRD
301: LSYCKIVEAI AETTAPLTPM EELLAKIPSQ RPYISSPKKP DIAAVSVPDP PANVVTVEPK VATQQETAQP KPVAKQPLSP YIVYDDLKPP SSPSPSQPGG
401: GKPTKISETV PKPSASDTPS SVPGVDGISQ TTSSSKVEKP LSPYVAYPDL KPPTSPSPNA PTVSVSTPAA AGVPEIDTIS SNGPAQLSAA DEPKEEHLPE
501: PKSRPLSPYT MYEDLKPPAS PSPSFRNS
Best Arabidopsis Sequence Match ( AT3G18890.1 )
(BLAST)
001: MEGTCFLRGQ PLTTIPSLPS RKGFLLQRWK TNRIVRFSGF KNHSVSGKSR SFDLSLRASG PIRASSVVTE ASPTNLNSKE EDLVFVAGAT GKVGSRTVRE
101: LLKLGFRVRA GVRSAQRAGS LVQSVKEMKL QNTDEGTQPV EKLEIVECDL EKKDSIQPAL GNASVIICCI GASEKEISDI TGPYRIDYLA TKNLVDAATS
201: AKVNNFILVT SLGTNKFGFP AAILNLFWGV LCWKRKAEEA LIESGLNYAI VRPGGMERPT DAYKETHNLT LALDDTLFGG QVSNLQVAEL LACMAKNPQL
301: SFSKIVEVVA ETTAPLTPIE KLLEKIPSKR PYVPPPKASV ATKEVKPVPT KPVTQEPTAP KEDEAPPKEK NVKPRPLSPY ASYEDLKPPT SPIPNSTTSV
401: SPAKSKEVDA TQVPVEANVV PVPDSTSNVP VVEVKQVEEK KERPLSPYAR YENLKPPSSP SPTASSTRKS DSLSPGPTDS DTDKSSTVAK TVTETAVATS
501: VTETSVATSV PETAVATSVT ETAAPATSKM RPLSPYAIYA DLKPPTSPTP ASTGPKEAAS VEDNSELPGG NNDVLKTVDG NLNTIPPSTP EAVPVVSSAI
601: DTSLASGDNT AQPKPRPLSP YTMYADMKPP TSPLPSPVTN H
Arabidopsis Description
TIC62Protein TIC 62, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0U5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.