Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 8
- cytosol 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH29518 | Soybean | vacuole | 94.13 | 89.23 |
KRH29515 | Soybean | plastid | 29.73 | 80.93 |
KRH24514 | Soybean | plastid | 51.89 | 65.24 |
VIT_03s0063g02020.t01 | Wine grape | plastid | 61.36 | 61.25 |
Zm00001d007921_P001 | Maize | plastid | 34.85 | 58.41 |
GSMUA_Achr8P04880_001 | Banana | endoplasmic reticulum, vacuole | 49.43 | 51.68 |
Os10t0100300-01 | Rice | nucleus, plastid | 48.3 | 51.31 |
EER97808 | Sorghum | plastid | 36.55 | 48.86 |
CDX99298 | Canola | plastid | 55.68 | 45.87 |
AT3G18890.1 | Thale cress | plastid | 54.73 | 45.09 |
CDX92286 | Canola | plastid | 54.55 | 44.86 |
PGSC0003DMT400021326 | Potato | cytosol, peroxisome, plastid | 57.58 | 44.51 |
Bra022369.1-P | Field mustard | plastid | 54.17 | 44.48 |
TraesCS5D01G277900.1 | Wheat | plastid | 46.59 | 43.85 |
TraesCS5B01G270200.1 | Wheat | plastid | 46.78 | 43.49 |
Solyc10g051110.1.1 | Tomato | plastid | 57.58 | 41.42 |
TraesCS5A01G269800.1 | Wheat | cytosol, extracellular, plastid | 46.4 | 37.87 |
HORVU5Hr1G074000.3 | Barley | mitochondrion | 46.21 | 35.62 |
KRH42344 | Soybean | plastid | 16.48 | 30.0 |
KRH58466 | Soybean | plastid | 16.29 | 29.45 |
KRG99976 | Soybean | nucleus | 12.12 | 25.1 |
KRH07338 | Soybean | plastid | 13.64 | 21.62 |
KRH49116 | Soybean | nucleus | 12.88 | 20.54 |
KRH66235 | Soybean | plastid | 13.64 | 20.34 |
Protein Annotations
EMBL:ACUP02007178 | EnsemblPlants:KRH24515 | EnsemblPlantsGene:GLYMA_12G046200 | EntrezGene:100779056 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom |
InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR14194 | PANTHER:PTHR14194:SF83 | PFAM:PF13460 | ProteinID:KRH24515 | ProteinID:KRH24515.1 |
SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000233D49F | UniProt:I1LQ66 | MapMan:1.1.5.2.2.2 | MapMan:23.1.3.5.3 |
Description
hypothetical protein
Coordinates
chr12:+:3354093..3359660
Molecular Weight (calculated)
55755.2 Da
IEP (calculated)
7.454
GRAVY (calculated)
-0.277
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAFSVQSLT ATTIPSSLSR RGATDKPSAT SHVNLSHFMR YPCTTRSTKQ KILCTRAQAS GSTKSSTGSA EGISEKTDSK DDNLVFVAGA TGRVGSRTVR
101: ELIKLGFRVR AGVRSAQRAG ALVQSVEQLK LDGASGGGQA VEKLEIVECD LEKPETIGSA LGDASTVICS IGASEKEVFD ITGPFRIDYQ ATKNLIDAAT
201: VAKVNHFILV TSLGTNKIGF PAAILNLFWG VLVWKRKAEE ALLASGLPYT IVRPGGMERP TDAFKETHNI TLSTEDTLFG GLVSNLQIAE LLAVMAKNRD
301: LSYCKIVEAI AETTAPLTPM EELLAKIPSQ RPYISSPKKP DIAAVSVPDP PANVVTVEPK VATQQETAQP KPVAKQPLSP YIVYDDLKPP SSPSPSQPGG
401: GKPTKISETV PKPSASDTPS SVPGVDGISQ TTSSSKVEKP LSPYVAYPDL KPPTSPSPNA PTVSVSTPAA AGVPEIDTIS SNGPAQLSAA DEPKEEHLPE
501: PKSRPLSPYT MYEDLKPPAS PSPSFRNS
101: ELIKLGFRVR AGVRSAQRAG ALVQSVEQLK LDGASGGGQA VEKLEIVECD LEKPETIGSA LGDASTVICS IGASEKEVFD ITGPFRIDYQ ATKNLIDAAT
201: VAKVNHFILV TSLGTNKIGF PAAILNLFWG VLVWKRKAEE ALLASGLPYT IVRPGGMERP TDAFKETHNI TLSTEDTLFG GLVSNLQIAE LLAVMAKNRD
301: LSYCKIVEAI AETTAPLTPM EELLAKIPSQ RPYISSPKKP DIAAVSVPDP PANVVTVEPK VATQQETAQP KPVAKQPLSP YIVYDDLKPP SSPSPSQPGG
401: GKPTKISETV PKPSASDTPS SVPGVDGISQ TTSSSKVEKP LSPYVAYPDL KPPTSPSPNA PTVSVSTPAA AGVPEIDTIS SNGPAQLSAA DEPKEEHLPE
501: PKSRPLSPYT MYEDLKPPAS PSPSFRNS
001: MEGTCFLRGQ PLTTIPSLPS RKGFLLQRWK TNRIVRFSGF KNHSVSGKSR SFDLSLRASG PIRASSVVTE ASPTNLNSKE EDLVFVAGAT GKVGSRTVRE
101: LLKLGFRVRA GVRSAQRAGS LVQSVKEMKL QNTDEGTQPV EKLEIVECDL EKKDSIQPAL GNASVIICCI GASEKEISDI TGPYRIDYLA TKNLVDAATS
201: AKVNNFILVT SLGTNKFGFP AAILNLFWGV LCWKRKAEEA LIESGLNYAI VRPGGMERPT DAYKETHNLT LALDDTLFGG QVSNLQVAEL LACMAKNPQL
301: SFSKIVEVVA ETTAPLTPIE KLLEKIPSKR PYVPPPKASV ATKEVKPVPT KPVTQEPTAP KEDEAPPKEK NVKPRPLSPY ASYEDLKPPT SPIPNSTTSV
401: SPAKSKEVDA TQVPVEANVV PVPDSTSNVP VVEVKQVEEK KERPLSPYAR YENLKPPSSP SPTASSTRKS DSLSPGPTDS DTDKSSTVAK TVTETAVATS
501: VTETSVATSV PETAVATSVT ETAAPATSKM RPLSPYAIYA DLKPPTSPTP ASTGPKEAAS VEDNSELPGG NNDVLKTVDG NLNTIPPSTP EAVPVVSSAI
601: DTSLASGDNT AQPKPRPLSP YTMYADMKPP TSPLPSPVTN H
101: LLKLGFRVRA GVRSAQRAGS LVQSVKEMKL QNTDEGTQPV EKLEIVECDL EKKDSIQPAL GNASVIICCI GASEKEISDI TGPYRIDYLA TKNLVDAATS
201: AKVNNFILVT SLGTNKFGFP AAILNLFWGV LCWKRKAEEA LIESGLNYAI VRPGGMERPT DAYKETHNLT LALDDTLFGG QVSNLQVAEL LACMAKNPQL
301: SFSKIVEVVA ETTAPLTPIE KLLEKIPSKR PYVPPPKASV ATKEVKPVPT KPVTQEPTAP KEDEAPPKEK NVKPRPLSPY ASYEDLKPPT SPIPNSTTSV
401: SPAKSKEVDA TQVPVEANVV PVPDSTSNVP VVEVKQVEEK KERPLSPYAR YENLKPPSSP SPTASSTRKS DSLSPGPTDS DTDKSSTVAK TVTETAVATS
501: VTETSVATSV PETAVATSVT ETAAPATSKM RPLSPYAIYA DLKPPTSPTP ASTGPKEAAS VEDNSELPGG NNDVLKTVDG NLNTIPPSTP EAVPVVSSAI
601: DTSLASGDNT AQPKPRPLSP YTMYADMKPP TSPLPSPVTN H
Arabidopsis Description
TIC62Protein TIC 62, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0U5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.