CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66235	Soybean	plastid	90.69	85.31
PGSC0003DMT400058473	Potato	cytosol	55.86	71.81
Zm00001d038694_P001	Maize	cytosol	23.12	71.3
Zm00001d040326_P001	Maize	plastid	47.15	68.86
Solyc01g008920.2.1	Tomato	plastid	65.17	66.56
Bra024000.1-P	Field mustard	plastid	63.96	64.55
Zm00001d046769_P001	Maize	cytosol	36.94	64.4
VIT_06s0009g03780.t01	Wine grape	plastid	64.56	63.99
CDY68555	Canola	plastid	63.36	63.75
CDY13439	Canola	plastid	63.36	63.55
AT4G31530.2	Thale cress	plastid	63.66	62.72
Zm00001d047463_P001	Maize	plastid	63.06	62.5
EER92259	Sorghum	plastid	62.46	61.72
Zm00001d029200_P001	Maize	plastid	62.16	61.42
GSMUA_Achr3P17500_001	Banana	plastid	60.66	60.12
TraesCS4D01G166200.1	Wheat	plastid	57.96	59.02
TraesCS6B01G093300.1	Wheat	plastid	58.26	58.97
TraesCS4A01G189000.1	Wheat	plastid	57.66	58.72
TraesCS4D01G124000.1	Wheat	plastid	57.66	58.72
Os03t0355900-00	Rice	cytosol	3.3	57.89
Zm00001d037076_P001	Maize	cytosol	20.72	56.1
HORVU2Hr1G069110.2	Barley	plastid	58.56	55.24
Zm00001d032783_P001	Maize	plastid	43.84	41.6
KRG99976	Soybean	nucleus	22.82	29.8
KRH58466	Soybean	plastid	24.62	28.08
KRH42344	Soybean	plastid	24.32	27.93
KRH49116	Soybean	nucleus	24.32	24.47
KRH29515	Soybean	plastid	10.51	18.04
KRH24514	Soybean	plastid	19.22	15.24
KRH24515	Soybean	plastid	21.62	13.64
KRH29518	Soybean	vacuole	21.62	12.93

Protein Annotations

EMBL:ACUP02009968	EnsemblPlants:KRH07338	EnsemblPlantsGene:GLYMA_16G082200	EntrezGene:100791376	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF384	PFAM:PF13460	ProteinID:KRH07338	ProteinID:KRH07338.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000295D8E1	UniProt:K7MFW6	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr16:-:9017828..9025255

Molecular Weight (calculated)

36663.7 Da

IEP (calculated)

8.929

GRAVY (calculated)

-0.296

Length

333 amino acids

Sequence
(BLAST)

001: MASTTSTLPM AFAQRHHSVT QRQVLFFTKF SNRVSLSSSL ASKRSCNYNC FYAKAQNALN EEAVETKSSE LKKDTQRTPS SSKLVLVAGG SGGVGQLVVA
101: SLLQQNIKSR LILRNPDKAT ELFGEQDKEK LQVFKGDTRK QGDLDPSMFE GVTHVICCTG TTAFPSRRWD DDNTPERVDW MGVKNLVSAL PSSVKSVVLV
201: SSIGVTKFNE LPWSIMNLFG VLKYKKMGED FLRRSGIPFT IIRAGRLTDG PYTSYDLNTL LKATAGQRRA VLIGQGDKLV GETSRIVVAE ACVQALDLEV
301: TENQVYEVNS VEGEGPGNEA KKWQELFEAA NTF

Best Arabidopsis Sequence Match ( AT4G31530.1 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.