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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038694_P001 Maize cytosol 31.66 75.93
Zm00001d040326_P001 Maize plastid 61.78 70.18
Solyc01g008920.2.1 Tomato plastid 85.71 68.1
Zm00001d046769_P001 Maize cytosol 49.03 66.49
Zm00001d037076_P001 Maize cytosol 27.03 56.91
KRH07338 Soybean plastid 71.81 55.86
Zm00001d047463_P001 Maize plastid 71.81 55.36
Zm00001d029200_P001 Maize plastid 71.81 55.19
VIT_06s0009g03780.t01 Wine grape plastid 71.04 54.76
EER92259 Sorghum plastid 71.04 54.6
Bra024000.1-P Field mustard plastid 69.11 54.24
CDY68555 Canola plastid 68.73 53.78
CDY13439 Canola plastid 68.73 53.61
KRH66235 Soybean plastid 72.59 53.11
TraesCS4D01G166200.1 Wheat plastid 66.8 52.91
GSMUA_Achr3P17500_001 Banana plastid 68.34 52.68
TraesCS4D01G124000.1 Wheat plastid 66.41 52.6
TraesCS4A01G189000.1 Wheat plastid 66.02 52.29
TraesCS6B01G093300.1 Wheat plastid 65.64 51.67
AT4G31530.2 Thale cress plastid 67.18 51.48
HORVU2Hr1G069110.2 Barley plastid 66.8 49.01
Zm00001d032783_P001 Maize plastid 52.51 38.75
PGSC0003DMT400022763 Potato extracellular 26.25 22.82
PGSC0003DMT400021415 Potato plastid 24.32 21.58
PGSC0003DMT400021326 Potato cytosol, peroxisome, plastid 24.32 9.22
Os03t0355900-00 Rice cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400058473EnsemblPlantsGene:PGSC0003DMG402022708Gene3D:3.40.50.720InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366
PANTHER:PTHR10366:SF384PFAM:PF13460PGSC:PGSC0003DMG402022708SUPFAM:SSF51735UniParc:UPI0002950084UniProt:M1C2Q3
MapMan:35.1:::::
Description
NAD dependent epimerase/dehydratase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG402022708]
Coordinates
chr1:+:5331296..5333768
Molecular Weight (calculated)
28948.7 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.310
Length
259 amino acids
Sequence
(BLAST)
001: MNDLTRSDQE HHKVYKPEKA GKRRRGQESW TETESGEAIV VASLLNRNVK LRLILRDPEK ATTLFGEQDE EKLQVWKGDT RSPTGIDPSV FEGVTHVICC
101: TGTTAFPSRR WDGDNTPERV DWDGVRNLVS ALPKSLKRIV LVSSIGVTKF NELPWSIMNL FGVLKYKKMG EDFVRNSGLP FTIIRAGRLT DGPYTSYDLN
201: TLLQATAGER RAVLIGQGDK LVGEVSRLVV AEACIQALDI EFTEGQTYEV NSIPVIILI
Best Arabidopsis Sequence Match ( AT4G31530.2 )
(BLAST)
001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKVPQTVSL KFEQSGNGDG PGSDPQQWRE LFKAAESK
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.