Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d038694_P001 | Maize | cytosol | 31.66 | 75.93 |
Zm00001d040326_P001 | Maize | plastid | 61.78 | 70.18 |
Solyc01g008920.2.1 | Tomato | plastid | 85.71 | 68.1 |
Zm00001d046769_P001 | Maize | cytosol | 49.03 | 66.49 |
Zm00001d037076_P001 | Maize | cytosol | 27.03 | 56.91 |
KRH07338 | Soybean | plastid | 71.81 | 55.86 |
Zm00001d047463_P001 | Maize | plastid | 71.81 | 55.36 |
Zm00001d029200_P001 | Maize | plastid | 71.81 | 55.19 |
VIT_06s0009g03780.t01 | Wine grape | plastid | 71.04 | 54.76 |
EER92259 | Sorghum | plastid | 71.04 | 54.6 |
Bra024000.1-P | Field mustard | plastid | 69.11 | 54.24 |
CDY68555 | Canola | plastid | 68.73 | 53.78 |
CDY13439 | Canola | plastid | 68.73 | 53.61 |
KRH66235 | Soybean | plastid | 72.59 | 53.11 |
TraesCS4D01G166200.1 | Wheat | plastid | 66.8 | 52.91 |
GSMUA_Achr3P17500_001 | Banana | plastid | 68.34 | 52.68 |
TraesCS4D01G124000.1 | Wheat | plastid | 66.41 | 52.6 |
TraesCS4A01G189000.1 | Wheat | plastid | 66.02 | 52.29 |
TraesCS6B01G093300.1 | Wheat | plastid | 65.64 | 51.67 |
AT4G31530.2 | Thale cress | plastid | 67.18 | 51.48 |
HORVU2Hr1G069110.2 | Barley | plastid | 66.8 | 49.01 |
Zm00001d032783_P001 | Maize | plastid | 52.51 | 38.75 |
PGSC0003DMT400022763 | Potato | extracellular | 26.25 | 22.82 |
PGSC0003DMT400021415 | Potato | plastid | 24.32 | 21.58 |
PGSC0003DMT400021326 | Potato | cytosol, peroxisome, plastid | 24.32 | 9.22 |
Os03t0355900-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400058473 | EnsemblPlantsGene:PGSC0003DMG402022708 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 |
PANTHER:PTHR10366:SF384 | PFAM:PF13460 | PGSC:PGSC0003DMG402022708 | SUPFAM:SSF51735 | UniParc:UPI0002950084 | UniProt:M1C2Q3 |
MapMan:35.1 | : | : | : | : | : |
Description
NAD dependent epimerase/dehydratase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG402022708]
Coordinates
chr1:+:5331296..5333768
Molecular Weight (calculated)
28948.7 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.310
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLTRSDQE HHKVYKPEKA GKRRRGQESW TETESGEAIV VASLLNRNVK LRLILRDPEK ATTLFGEQDE EKLQVWKGDT RSPTGIDPSV FEGVTHVICC
101: TGTTAFPSRR WDGDNTPERV DWDGVRNLVS ALPKSLKRIV LVSSIGVTKF NELPWSIMNL FGVLKYKKMG EDFVRNSGLP FTIIRAGRLT DGPYTSYDLN
201: TLLQATAGER RAVLIGQGDK LVGEVSRLVV AEACIQALDI EFTEGQTYEV NSIPVIILI
101: TGTTAFPSRR WDGDNTPERV DWDGVRNLVS ALPKSLKRIV LVSSIGVTKF NELPWSIMNL FGVLKYKKMG EDFVRNSGLP FTIIRAGRLT DGPYTSYDLN
201: TLLQATAGER RAVLIGQGDK LVGEVSRLVV AEACIQALDI EFTEGQTYEV NSIPVIILI
001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKVPQTVSL KFEQSGNGDG PGSDPQQWRE LFKAAESK
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKVPQTVSL KFEQSGNGDG PGSDPQQWRE LFKAAESK
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.