Factsheet for Zm00001d040326_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038694_P001	Maize	cytosol	42.54	89.81
Zm00001d046769_P001	Maize	cytosol	54.82	65.44
Zm00001d037076_P001	Maize	cytosol	34.21	63.41
PGSC0003DMT400058473	Potato	cytosol	70.18	61.78
Zm00001d029200_P001	Maize	plastid	82.89	56.08
EER92259	Sorghum	plastid	81.58	55.19
Zm00001d047463_P001	Maize	plastid	81.14	55.06
TraesCS4D01G166200.1	Wheat	plastid	75.44	52.6
TraesCS4A01G189000.1	Wheat	plastid	75.0	52.29
TraesCS4D01G124000.1	Wheat	plastid	75.0	52.29
TraesCS6B01G093300.1	Wheat	plastid	74.56	51.67
Solyc01g008920.2.1	Tomato	plastid	72.81	50.92
CDY68555	Canola	plastid	72.37	49.85
Bra024000.1-P	Field mustard	plastid	71.93	49.7
GSMUA_Achr3P17500_001	Banana	plastid	72.81	49.4
HORVU2Hr1G069110.2	Barley	plastid	75.88	49.01
CDY13439	Canola	plastid	71.05	48.8
AT4G31530.2	Thale cress	plastid	71.93	48.52
VIT_06s0009g03780.t01	Wine grape	plastid	71.49	48.51
KRH07338	Soybean	plastid	68.86	47.15
Zm00001d032783_P001	Maize	plastid	69.3	45.01
KRH66235	Soybean	plastid	69.3	44.63
Zm00001d035672_P001	Maize	peroxisome	14.47	26.83
Zm00001d034665_P001	Maize	plastid	25.44	22.57
Zm00001d031799_P001	Maize	plastid	27.63	22.26
Zm00001d011069_P001	Maize	plastid	26.32	20.13
Zm00001d007921_P001	Maize	plastid	22.37	16.19
Os03t0355900-00	Rice	cytosol	0.44	5.26

Protein Annotations

EnsemblPlants:Zm00001d040326_P001	EnsemblPlants:Zm00001d040326_T001	EnsemblPlantsGene:Zm00001d040326	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR10366	PANTHER:PTHR10366:SF384	PFAM:PF13460	ProteinID:ONM31174.1	SUPFAM:SSF51735	UniParc:UPI00084417A7
UniProt:A0A1D6MQ82	MapMan:35.2	:	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr3:-:38299877..38304645

Molecular Weight (calculated)

25298.9 Da

IEP (calculated)

8.022

GRAVY (calculated)

0.033

Length

228 amino acids

Sequence
(BLAST)

001: MEDTIMAPST LIIKSMSSMV DQVAAAVRSP AQEFYIKSRL LLRDPEKALT LFGKQDESVL QGVTHVICCT GTTAFPSKRW DGENTPERVD WNGIRNLVSA
101: LPQTIKRLVL VSSIGVTKYN EIPWSIMNLF GVLKYKKMGE DFVRNSGIPF TIIMPGRLTD GPYTSYDLNT LLKATTGERR AVVIGKGDKL VGEVSRLVVA
201: EACIQALDIE STEGQIYEIN SMKVLIFF

Best Arabidopsis Sequence Match ( AT4G31530.2 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKVPQTVSL KFEQSGNGDG PGSDPQQWRE LFKAAESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.