Factsheet for TraesCS6B01G093300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G166200.1	Wheat	plastid	97.57	98.17
TraesCS4D01G124000.1	Wheat	plastid	96.66	97.25
TraesCS4A01G189000.1	Wheat	plastid	95.74	96.33
HORVU2Hr1G069110.2	Barley	plastid	87.84	81.87
Zm00001d038694_P001	Maize	cytosol	25.53	77.78
Zm00001d040326_P001	Maize	plastid	51.67	74.56
Os03t0355900-00	Rice	cytosol	4.26	73.68
Zm00001d029200_P001	Maize	plastid	73.56	71.81
Zm00001d047463_P001	Maize	plastid	73.25	71.73
EER92259	Sorghum	plastid	72.64	70.92
Zm00001d046769_P001	Maize	cytosol	40.12	69.11
PGSC0003DMT400058473	Potato	cytosol	51.67	65.64
Bra024000.1-P	Field mustard	plastid	65.05	64.85
CDY68555	Canola	plastid	64.44	64.05
CDY13439	Canola	plastid	64.13	63.55
VIT_06s0009g03780.t01	Wine grape	plastid	63.53	62.2
AT4G31530.2	Thale cress	plastid	63.53	61.83
Solyc01g008920.2.1	Tomato	plastid	60.79	61.35
GSMUA_Achr3P17500_001	Banana	plastid	62.31	61.01
Zm00001d037076_P001	Maize	cytosol	22.49	60.16
KRH07338	Soybean	plastid	58.97	58.26
KRH66235	Soybean	plastid	59.88	55.65
Zm00001d032783_P001	Maize	plastid	46.5	43.59
TraesCS7B01G250100.1	Wheat	mitochondrion, plastid	24.62	28.42
TraesCS5B01G494600.1	Wheat	plastid	24.01	27.24
TraesCS1B01G037100.1	Wheat	plastid	24.62	27.0
TraesCS5B01G270200.1	Wheat	plastid	22.19	12.85

Protein Annotations

EnsemblPlants:TraesCS6B01G093300.1	EnsemblPlantsGene:TraesCS6B01G093300	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF384	PFAM:PF13460	SEG:seg	SUPFAM:SSF51735
TIGR:cd05243	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:69442322..69446915

Molecular Weight (calculated)

35277.1 Da

IEP (calculated)

9.090

GRAVY (calculated)

-0.205

Length

329 amino acids

Sequence
(BLAST)

001: MATAHLSPAL AVSSSRHPTS KHGQPPVLAQ PGGTAVLRSC SLPLSSRLAA SGRGGWRLAA AVEPRTAQQE EAEAEASSRL VLVVGGTGGV GQLLVASLLS
101: RKIKTRLLIR NPEKAASLFG KQDGSVLQVY EADTRNADAL NPEMFEGVTH VICTTGTTAF PSKRWDGDNT PERVDWDGVR NFVSAMPQTV KRLVLVSSIG
201: VTKYNEIPWS IMNLFGVLKY KKMAEDFVRN SGIPFTIIRP GRLTDGPYTS YDLNTLVKAT AGERRAVEIG QGDKLVGEAS RLVVAEACIQ ALDIESTQGK
301: IYEISSVKGE GPGSDQEKWK QLFAAAESN

Best Arabidopsis Sequence Match ( AT4G31530.1 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.