CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13439	Canola	plastid	97.28	96.99
Bra024000.1-P	Field mustard	plastid	96.37	96.67
AT4G31530.2	Thale cress	plastid	83.08	81.36
Zm00001d038694_P001	Maize	cytosol	25.08	76.85
Zm00001d040326_P001	Maize	plastid	49.85	72.37
VIT_06s0009g03780.t01	Wine grape	plastid	71.3	70.24
PGSC0003DMT400058473	Potato	cytosol	53.78	68.73
Zm00001d029200_P001	Maize	plastid	68.28	67.06
Solyc01g008920.2.1	Tomato	plastid	65.56	66.56
Zm00001d046769_P001	Maize	cytosol	38.37	66.49
EER92259	Sorghum	plastid	67.67	66.47
Zm00001d047463_P001	Maize	plastid	67.37	66.37
GSMUA_Achr3P17500_001	Banana	plastid	66.77	65.77
TraesCS4D01G166200.1	Wheat	plastid	63.75	64.53
TraesCS4D01G124000.1	Wheat	plastid	63.75	64.53
TraesCS6B01G093300.1	Wheat	plastid	64.05	64.44
TraesCS4A01G189000.1	Wheat	plastid	63.44	64.22
KRH07338	Soybean	plastid	63.75	63.36
Os03t0355900-00	Rice	cytosol	3.63	63.16
Zm00001d037076_P001	Maize	cytosol	23.26	62.6
KRH66235	Soybean	plastid	65.26	61.02
HORVU2Hr1G069110.2	Barley	plastid	63.14	59.21
Zm00001d032783_P001	Maize	plastid	43.81	41.31
CDY40342	Canola	endoplasmic reticulum, peroxisome, plastid	24.17	31.62
CDY10458	Canola	peroxisome, plastid	23.87	31.23
CDY43675	Canola	plastid	24.47	28.83
CDX91377	Canola	cytosol	21.45	25.36
CDY65254	Canola	plastid	23.87	24.38
CDX93359	Canola	plastid	23.87	24.01
CDX74941	Canola	plastid	15.71	18.06
CDX92286	Canola	plastid	23.26	11.99
CDX99298	Canola	plastid	22.36	11.54

Protein Annotations

EnsemblPlants:CDY68555	EnsemblPlantsGene:GSBRNA2T00075439001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF384	PFAM:PF13460	ProteinID:CDY68555	ProteinID:CDY68555.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI0004EEB35A	UniProt:A0A078JQ27	MapMan:35.2	:	:	:

Description

BnaCnng59510DBnaCnng59510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQ27]

Coordinates

chrLK037539:+:1056..2930

Molecular Weight (calculated)

35709.7 Da

IEP (calculated)

5.549

GRAVY (calculated)

-0.109

Length

331 amino acids

Sequence
(BLAST)

001: MATILSFAPL SVPSTIYPKP SLRIPLFTSL PLQSSSSSSY GLTSSFLVRN EASLSPSSSP IQALAEEEAV DDSSPLASSS KLVLVVGGTG GVGQLVVASL
101: LKRNIKSRLL LRDLEKATKL FGKQDEDSLQ VVKGDTRNAE DLDPSMFEGV THVICCTGTT AFPSQRWNGE NTPDKVDWEG VRNLISALPS SVERVVLVSS
201: VGVTKPNELP WSIMNLFGVL KYKKMGEDFL RESGLPFTII RPGRLTDGPY TSYDLNTLLK ATAGERRAVV IGQGDKLVGE VSRLVVAEAC IQALDIEFTQ
301: GKAYEINSVK GDGPGSDPQK WRELFKVAES K

Best Arabidopsis Sequence Match ( AT4G31530.1 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.