Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 3
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009604.1-P | Field mustard | endoplasmic reticulum, peroxisome, plastid | 98.81 | 98.81 |
| CDY40342 | Canola | endoplasmic reticulum, peroxisome, plastid | 98.02 | 98.02 |
| AT5G02240.1 | Thale cress | endoplasmic reticulum, peroxisome, plastid | 93.68 | 93.68 |
| CDY65254 | Canola | plastid | 79.45 | 62.04 |
| CDX93359 | Canola | plastid | 79.45 | 61.09 |
| CDX91377 | Canola | cytosol | 63.24 | 57.14 |
| CDX74941 | Canola | plastid | 52.17 | 45.83 |
| CDY68555 | Canola | plastid | 31.23 | 23.87 |
| CDY13439 | Canola | plastid | 31.23 | 23.8 |
| CDY43675 | Canola | plastid | 26.09 | 23.49 |
| CDX99298 | Canola | plastid | 26.09 | 10.3 |
| CDX92286 | Canola | plastid | 26.09 | 10.28 |
Protein Annotations
| EnsemblPlants:CDY10458 | EnsemblPlantsGene:GSBRNA2T00032385001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR14194 |
| PANTHER:PTHR14194:SF61 | PFAM:PF13460 | ProteinID:CDY10458 | ProteinID:CDY10458.1 | SUPFAM:SSF51735 | UniParc:UPI0004EDE1A8 |
| UniProt:A0A078FEB8 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng03590DBnaCnng03590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEB8]
Coordinates
chrLK032003:-:621146..622784
Molecular Weight (calculated)
27181.5 Da
IEP (calculated)
6.560
GRAVY (calculated)
-0.325
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLPTVLVT GASGKTGQIV YKKLKERSDK FVAKGLVRTP QGKEKIGGED DVFIGDIRDA DSITPAIQGI DALVILTSAV PKMKPGFDPT KGGRPEFIFD
101: DGQYPEQVDW IGQKNQIDAA KAAGVKHIVL VGSMGGTNPD HPLNKLGNGN ILIWKRKAEQ YLADSGTPYT IIRAGGLLDK EGGARELLVG KDDELLQTDT
201: KTVPRADVAE VCIQALLFEE AKNKAFDLGS KPEGTSSPTN DFKALFSQVT ARF
101: DGQYPEQVDW IGQKNQIDAA KAAGVKHIVL VGSMGGTNPD HPLNKLGNGN ILIWKRKAEQ YLADSGTPYT IIRAGGLLDK EGGARELLVG KDDELLQTDT
201: KTVPRADVAE VCIQALLFEE AKNKAFDLGS KPEGTSSPTN DFKALFSQVT ARF
001: MANLPTVLVT GASGRTGQIV YKKLKEGSDK FVAKGLVRSA QGKEKIGGEA DVFIGDITDA DSINPAFQGI DALVILTSAV PKMKPGFDPT KGGRPEFIFE
101: DGQYPEQVDW IGQKNQIDAA KVAGVKHIVV VGSMGGTNPD HPLNKLGNGN ILVWKRKAEQ YLADSGTPYT IIRAGGLLDK EGGVRELLVG KDDELLQTDT
201: KTVPRADVAE VCIQALLFEE AKNKAFDLGS KPEGTSTPTK DFKALFSQVT SRF
101: DGQYPEQVDW IGQKNQIDAA KVAGVKHIVV VGSMGGTNPD HPLNKLGNGN ILVWKRKAEQ YLADSGTPYT IIRAGGLLDK EGGVRELLVG KDDELLQTDT
201: KTVPRADVAE VCIQALLFEE AKNKAFDLGS KPEGTSTPTK DFKALFSQVT SRF
Arabidopsis Description
Uncharacterized protein At5g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG6]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.