CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65254	Canola	plastid	95.74	97.22
AT2G37660.1	Thale cress	plastid	86.32	87.38
GSMUA_Achr6P15220_001	Banana	cytosol, peroxisome, plastid	65.35	84.31
Solyc09g010930.2.1	Tomato	extracellular	62.61	80.78
CDY40342	Canola	endoplasmic reticulum, peroxisome, plastid	62.01	80.63
CDY10458	Canola	peroxisome, plastid	61.09	79.45
KRG99976	Soybean	nucleus	61.4	79.22
Zm00001d035672_P001	Maize	peroxisome	28.57	76.42
Zm00001d011069_P001	Maize	plastid	68.39	75.5
EES17563	Sorghum	plastid	66.57	73.24
PGSC0003DMT400022763	Potato	extracellular	65.96	72.82
TraesCS1B01G037100.1	Wheat	plastid	65.96	72.33
TraesCS1D01G030600.1	Wheat	golgi	65.65	72.24
TraesCS1A01G030100.1	Wheat	plastid	64.44	70.9
Os05t0110300-01	Rice	extracellular	64.74	67.83
VIT_08s0007g00530.t01	Wine grape	extracellular, plastid	66.87	66.87
HORVU1Hr1G004430.3	Barley	plastid	64.13	66.56
CDX74941	Canola	plastid	58.05	66.32
KRH49116	Soybean	nucleus	65.96	65.56
CDX91377	Canola	cytosol	54.71	64.29
CDY43675	Canola	plastid	22.19	25.98
CDY68555	Canola	plastid	24.01	23.87
CDY13439	Canola	plastid	24.01	23.8
CDX92286	Canola	plastid	20.06	10.28
CDX99298	Canola	plastid	19.76	10.14

Protein Annotations

EnsemblPlants:CDX93359	EnsemblPlantsGene:GSBRNA2T00155344001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR14194
PANTHER:PTHR14194:SF61	PFAM:PF13460	ProteinID:CDX93359	ProteinID:CDX93359.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI0004EDEE64	MapMan:35.1	:	:	:	:

Description

BnaC04g45370D

Coordinates

chrLK031875:+:1297222..1299137

Molecular Weight (calculated)

35560.5 Da

IEP (calculated)

9.405

GRAVY (calculated)

-0.247

Length

329 amino acids

Sequence
(BLAST)

001: MAMSTTTLFH ALVPSNTYKS RAVSSSFVSV PRSSTPPSSP SLQFRSLVSD TTSIYGRRKF TGNLRRVSLT VSAAAAAEPL TVLVTGAGGR TGQIVYKKLK
101: ERSDQFVARG LVRTKESKEK IGGEDEVFVG DIRDPESIAP AVQGIDALVI LTSAVPKMKP GFDPSKGERP EFYFEEGAYP EQVDWIGQKN QIDAAKAAGI
201: KQIVLVGSMG GTNINNPLNS IGNANILVWK RKAEQYLADS GIPYTIIRAG GLQDKEGGIR ELIVGKDDEI LETEMRTIAR ADVAEVCVQQ ALQLEEAKYK
301: ALDLASKPEG TGTPTKDFKA LFTQVTARF

Best Arabidopsis Sequence Match ( AT2G37660.1 )
(BLAST)

001: MAMMTTTTTT FFHPLLPANT YKSGAVASSF VSVPRSSSLQ FRSLVSDSTS ICGPSKFTGK NRRVSVTVSA AATTEPLTVL VTGAGGRTGQ IVYKKLKERS
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF

Arabidopsis Description

Uncharacterized protein At2g37660, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80934]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.