Factsheet for GSMUA_Achr6P15220_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
plastid 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99976	Soybean	nucleus	83.14	83.14
Solyc09g010930.2.1	Tomato	extracellular	82.35	82.35
Zm00001d035672_P001	Maize	peroxisome	38.82	80.49
TraesCS1D01G030600.1	Wheat	golgi	83.92	71.57
Zm00001d011069_P001	Maize	plastid	83.14	71.14
PGSC0003DMT400022763	Potato	extracellular	83.14	71.14
TraesCS1B01G037100.1	Wheat	plastid	83.53	71.0
TraesCS1A01G030100.1	Wheat	plastid	82.75	70.57
EES17563	Sorghum	plastid	82.35	70.23
Os05t0110300-01	Rice	extracellular	83.14	67.52
Bra005175.1-P	Field mustard	plastid	84.71	67.08
CDY65254	Canola	plastid	84.71	66.67
HORVU1Hr1G004430.3	Barley	plastid	82.75	66.56
AT2G37660.1	Thale cress	plastid	83.92	65.85
VIT_08s0007g00530.t01	Wine grape	extracellular, plastid	84.71	65.65
Bra017165.1-P	Field mustard	plastid	84.31	65.55
CDX93359	Canola	plastid	84.31	65.35
KRH49116	Soybean	nucleus	83.14	64.05
CDX91377	Canola	cytosol	66.67	60.71
CDX74941	Canola	plastid	52.55	46.53
GSMUA_Achr3P17500_001	Banana	plastid	29.02	22.02
GSMUA_Achr8P04880_001	Banana	endoplasmic reticulum, vacuole	23.14	11.68
GSMUA_Achr4P31210_001	Banana	plastid	6.27	9.09

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009605	GO:GO:0009607
GO:GO:0042742	GO:GO:0048046	EnsemblPlantsGene:GSMUA_Achr6G15220_001	EnsemblPlants:GSMUA_Achr6P15220_001	EnsemblPlants:GSMUA_Achr6T15220_001	UniProt:M0T770
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13460	PANTHER:PTHR14194	PANTHER:PTHR14194:SF61	SUPFAM:SSF51735
UniParc:UPI0002960E48	:	:	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:Projected from Arabidopsis thaliana (AT2G37660) TAIR;Acc:AT2G37660]

Coordinates

chr6:+:10129104..10133730

Molecular Weight (calculated)

27603.1 Da

IEP (calculated)

6.563

GRAVY (calculated)

-0.254

Length

255 amino acids

Sequence
(BLAST)

001: MADGPAPVVL VTGAGGRTGQ IVYKKLKERS DQFVARGLVR TAESKEKIGG ADDVFVGDIR NAESIIPAVQ GIHALIILTS AVPKMKPGFD PSKGERPEFY
101: FEDGSYPEQV DWIGQKNQID AARAVGVKQI VLVGSMGGTD INHPLNNIGN GKILIWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGVRELL VGKDDELLKT
201: ETRTIARPDV AEVCIQALQF EEAKFKAFDL ASKPEGTGTP TTDFKALFSQ VTTRF

Best Arabidopsis Sequence Match ( AT2G37660.1 )
(BLAST)

001: MAMMTTTTTT FFHPLLPANT YKSGAVASSF VSVPRSSSLQ FRSLVSDSTS ICGPSKFTGK NRRVSVTVSA AATTEPLTVL VTGAGGRTGQ IVYKKLKERS
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF

Arabidopsis Description

Uncharacterized protein At2g37660, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80934]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.