Factsheet for Bra005175.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G37660.1	Thale cress	plastid	88.51	87.69
Bra017165.1-P	Field mustard	plastid	89.13	87.5
GSMUA_Achr6P15220_001	Banana	cytosol, peroxisome, plastid	67.08	84.71
Solyc09g010930.2.1	Tomato	extracellular	65.53	82.75
Bra009604.1-P	Field mustard	endoplasmic reticulum, peroxisome, plastid	64.6	82.21
KRG99976	Soybean	nucleus	63.98	80.78
Zm00001d035672_P001	Maize	peroxisome	30.12	78.86
PGSC0003DMT400022763	Potato	extracellular	69.57	75.17
Zm00001d011069_P001	Maize	plastid	69.57	75.17
CDX74941	Canola	plastid	67.08	75.0
TraesCS1D01G030600.1	Wheat	golgi	68.01	73.24
TraesCS1B01G037100.1	Wheat	plastid	68.01	73.0
EES17563	Sorghum	plastid	67.7	72.91
TraesCS1A01G030100.1	Wheat	plastid	66.46	71.57
Os05t0110300-01	Rice	extracellular	66.15	67.83
HORVU1Hr1G004430.3	Barley	plastid	66.46	67.51
VIT_08s0007g00530.t01	Wine grape	extracellular, plastid	68.94	67.48
KRH49116	Soybean	nucleus	68.63	66.77
Bra021912.1-P	Field mustard	plastid	23.6	26.3
Bra024000.1-P	Field mustard	plastid	25.47	24.85
Bra022369.1-P	Field mustard	plastid	22.36	11.2

Protein Annotations

EnsemblPlants:Bra005175.1	EnsemblPlants:Bra005175.1-P	EnsemblPlantsGene:Bra005175	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR14194	PANTHER:PTHR14194:SF61	PFAM:PF13460	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00025478C6
UniProt:M4CLT8	MapMan:35.1	:	:	:	:

Description

AT2G37660 (E=2e-145) | binding / catalytic/ coenzyme binding

Coordinates

chrA05:+:3833254..3835273

Molecular Weight (calculated)

34637.4 Da

IEP (calculated)

8.895

GRAVY (calculated)

-0.214

Length

322 amino acids

Sequence
(BLAST)

001: MAATTTFFRP LLPSNSYKSR AVVDSPFVSV PRSSIPSSSP SLQLRSLVSD DRRKSNGKLR VSVIVSAAAT TEPLTVLVTG AGGRTGQIVY KKLKERSDEF
101: VARGLVRTKE SKEKIGGEDE VFIGDIRDPS AIAPAVQGID ALVILTSAVP QMKPGFDPSK GGRPEFYFDE GAYPEQVDWI GQKNQIDAAK AAGVKQIVLV
201: GSMGGTNINH PLNSIGNANI LVWKRKAEQY LADSGIPYTI IRAGGLQDKE GGIRELLVGK DDELLETETR TIARADVAEV CVQALQLEEA KFKALDLASK
301: PEGTGTPTTD FKALFAQVTT RF

Best Arabidopsis Sequence Match ( AT2G37660.1 )
(BLAST)

001: MAMMTTTTTT FFHPLLPANT YKSGAVASSF VSVPRSSSLQ FRSLVSDSTS ICGPSKFTGK NRRVSVTVSA AATTEPLTVL VTGAGGRTGQ IVYKKLKERS
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF

Arabidopsis Description

Uncharacterized protein At2g37660, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80934]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.