Factsheet for Bra021912.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra014355.1-P
Bra016705.1-P
Bra019660.1-P
Bra021502.1-P
Bra021503.1-P
Bra037983.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34460.1	Bra016705.1-P	AT1G14340.1	21798944
AT2G34460.1	Bra019660.1-P	AT1G14340.1	21798944
AT2G34460.1	Bra014355.1-P	AT1G55190.1	21798944
AT2G34460.1	Bra037983.1-P	AT1G55190.1	21798944
AT2G34460.1	Bra021502.1-P	AT3G13720.1	21798944
AT2G34460.1	Bra021503.1-P	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43675	Canola	plastid	95.5	98.22
AT2G34460.1	Thale cress	plastid	80.97	83.57
VIT_10s0003g03090.t01	Wine grape	cytosol	64.36	74.4
KRH42344	Soybean	plastid	67.82	67.59
KRH58466	Soybean	plastid	68.17	67.47
Solyc02g070770.2.1	Tomato	plastid	62.98	62.33
PGSC0003DMT400021415	Potato	plastid	62.98	62.33
TraesCS7D01G346000.1	Wheat	plastid	60.9	61.75
TraesCS7B01G250100.1	Wheat	mitochondrion, plastid	60.9	61.75
Solyc02g070760.2.1	Tomato	plastid	62.63	61.56
HORVU7Hr1G083360.1	Barley	mitochondrion, plastid	60.55	61.4
TraesCS7A01G338800.1	Wheat	mitochondrion, plastid	60.21	61.05
EES15131	Sorghum	plastid	59.17	60.42
Os06t0360300-01	Rice	plastid	60.21	59.79
Zm00001d031799_P001	Maize	plastid	58.48	59.72
GSMUA_Achr4P31210_001	Banana	plastid	27.68	45.45
Bra009604.1-P	Field mustard	endoplasmic reticulum, peroxisome, plastid	22.84	26.09
Bra024000.1-P	Field mustard	plastid	28.03	24.55
Bra005175.1-P	Field mustard	plastid	26.3	23.6
Bra017165.1-P	Field mustard	plastid	26.3	23.17
Bra022369.1-P	Field mustard	plastid	34.95	15.71

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EnsemblPlantsGene:Bra021912	EnsemblPlants:Bra021912.1	EnsemblPlants:Bra021912.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009941	GO:GO:0010287	GO:GO:0016020	UniProt:M4DZG5
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13460	PANTHER:PTHR15020	PANTHER:PTHR15020:SF11	SUPFAM:SSF51735
UniParc:UPI00025438C8	SEG:seg	:	:	:	:

Description

AT2G34460 (E=5e-111) | flavin reductase-related

Coordinates

chrA04:+:15164299..15165363

Molecular Weight (calculated)

31034.0 Da

IEP (calculated)

9.021

GRAVY (calculated)

-0.080

Length

289 amino acids

Sequence
(BLAST)

001: MTTSLLLLRH SSSPAAVFFS SSSFVFAKNT NSSRSFTSIK MERGEASEQI TGEKKKVFVA GATGQTGKRI VEQLLSRGFA VKAGVRDVDK AKTSFRQDPS
101: LHFVKADVTE GSEKLAEAIG DDSHAVICAT GFRPGFDLFA PWKIDNFGTV SLVDACKKQG VNRFVLVSSI LVNGAATGQI LNPAYIFLNV FGLTLVAKLQ
201: AEKYIKRSGV NYTIVRPGGL KNDPPSGNVV MEPEDTLSGG SISRDQVAEV AVEALLDEEE SSYKVVEIVA SADAPKRSYK DLFASVKGH

Best Arabidopsis Sequence Match ( AT2G34460.1 )
(BLAST)

001: MATSLLLRHS SAVFFSQSSF FTKNKSFRSF TSIKMEKGEA ENAVKTKKVF VAGATGQTGK RIVEQLLSRG FAVKAGVRDV EKAKTSFKDD PSLQIVRADV
101: TEGPDKLAEV IGDDSQAVIC ATGFRPGFDI FTPWKVDNFG TVNLVDACRK QGVEKFVLVS SILVNGAAMG QILNPAYLFL NLFGLTLVAK LQAEKYIKKS
201: GINYTIVRPG GLKNDPPTGN VVMEPEDTLY EGSISRDLVA EVAVEALLQE ESSFKVVEIV ARAEAPKRSY KDLFASVKGQ

Arabidopsis Description

Uncharacterized protein At2g34460, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H124]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.