Factsheet for Bra024000.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13439	Canola	plastid	97.58	96.99
CDY68555	Canola	plastid	96.67	96.37
AT4G31530.2	Thale cress	plastid	83.03	81.07
Zm00001d038694_P001	Maize	cytosol	25.15	76.85
Zm00001d040326_P001	Maize	plastid	49.7	71.93
VIT_06s0009g03780.t01	Wine grape	plastid	72.73	71.43
PGSC0003DMT400058473	Potato	cytosol	54.24	69.11
Solyc01g008920.2.1	Tomato	plastid	66.06	66.87
EER92259	Sorghum	plastid	68.18	66.77
Zm00001d046769_P001	Maize	cytosol	38.48	66.49
Zm00001d029200_P001	Maize	plastid	67.88	66.47
Zm00001d047463_P001	Maize	plastid	67.58	66.37
GSMUA_Achr3P17500_001	Banana	plastid	67.27	66.07
TraesCS4D01G124000.1	Wheat	plastid	64.55	65.14
TraesCS4D01G166200.1	Wheat	plastid	64.55	65.14
TraesCS6B01G093300.1	Wheat	plastid	64.85	65.05
TraesCS4A01G189000.1	Wheat	plastid	64.24	64.83
KRH07338	Soybean	plastid	64.55	63.96
Os03t0355900-00	Rice	cytosol	3.64	63.16
Zm00001d037076_P001	Maize	cytosol	23.33	62.6
KRH66235	Soybean	plastid	66.06	61.58
HORVU2Hr1G069110.2	Barley	plastid	63.64	59.49
Zm00001d032783_P001	Maize	plastid	43.33	40.74
Bra009604.1-P	Field mustard	endoplasmic reticulum, peroxisome, plastid	24.55	32.02
Bra021912.1-P	Field mustard	plastid	24.55	28.03
Bra005175.1-P	Field mustard	plastid	24.85	25.47
Bra017165.1-P	Field mustard	plastid	24.24	24.39
Bra022369.1-P	Field mustard	plastid	23.33	11.98

Protein Annotations

EnsemblPlants:Bra024000.1	EnsemblPlants:Bra024000.1-P	EnsemblPlantsGene:Bra024000	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF384	PFAM:PF13460	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002540F1B	UniProt:M4E5E6	MapMan:35.2	:	:

Description

AT4G31530 (E=4e-121) | binding / catalytic

Coordinates

chrA03:+:28316597..28318256

Molecular Weight (calculated)

35386.3 Da

IEP (calculated)

7.197

GRAVY (calculated)

-0.086

Length

330 amino acids

Sequence
(BLAST)

001: MATILSFAPL SVPSTTYLKP SLRIPLFTSL PLPSSSSSSS SGLTSSFLVR NEASLSPSSS PIQALAEEAV DSSTSASSSK LVLVVGGTGG VGQLVVASLL
101: KRNIKSRLLL RDLEKATKLF GKQDEDSLQV VKGDTRNAED LDPSMFEGVT HVICCTGTTA FPSQRWSGDN TPDKVDWEGV RNLISALPSS VERVVLVSSV
201: GVTKPNELPW SIMNLFGVLK YKKMGEDFLR ESGLPFTIIR PGRLTDGPYT SYDLNTLLKA TAGERRAVVI GQGDKLVGEV SRLVVAEACI QALDIEFTQG
301: KAYEINSVKG DGPGSDPQKW RELFKVAESK

Best Arabidopsis Sequence Match ( AT4G31530.1 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.