CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07338	Soybean	plastid	85.31	90.69
PGSC0003DMT400058473	Potato	cytosol	53.11	72.59
Zm00001d038694_P001	Maize	cytosol	22.03	72.22
Zm00001d040326_P001	Maize	plastid	44.63	69.3
Solyc01g008920.2.1	Tomato	plastid	62.15	67.48
Bra024000.1-P	Field mustard	plastid	61.58	66.06
Zm00001d046769_P001	Maize	cytosol	35.31	65.44
CDY68555	Canola	plastid	61.02	65.26
VIT_06s0009g03780.t01	Wine grape	plastid	61.86	65.18
CDY13439	Canola	plastid	61.02	65.06
AT4G31530.2	Thale cress	plastid	60.17	63.02
Zm00001d047463_P001	Maize	plastid	59.32	62.5
EER92259	Sorghum	plastid	59.04	62.02
Zm00001d029200_P001	Maize	plastid	59.04	62.02
GSMUA_Achr3P17500_001	Banana	plastid	57.34	60.42
TraesCS4D01G166200.1	Wheat	plastid	55.37	59.94
TraesCS6B01G093300.1	Wheat	plastid	55.65	59.88
TraesCS4A01G189000.1	Wheat	plastid	55.08	59.63
TraesCS4D01G124000.1	Wheat	plastid	55.08	59.63
Os03t0355900-00	Rice	cytosol	3.11	57.89
Zm00001d037076_P001	Maize	cytosol	19.77	56.91
HORVU2Hr1G069110.2	Barley	plastid	55.65	55.81
Zm00001d032783_P001	Maize	plastid	42.37	42.73
KRG99976	Soybean	nucleus	21.75	30.2
KRH58466	Soybean	plastid	22.6	27.4
KRH42344	Soybean	plastid	22.32	27.24
KRH49116	Soybean	nucleus	23.16	24.77
KRH29515	Soybean	plastid	9.6	17.53
KRH24514	Soybean	plastid	18.64	15.71
KRH24515	Soybean	plastid	20.34	13.64
KRH29518	Soybean	vacuole	20.34	12.93

Protein Annotations

EMBL:ACUP02001927	EnsemblPlants:KRH66235	EnsemblPlantsGene:GLYMA_03G092500	EntrezGene:100804322	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF384	PFAM:PF13460	ProteinID:KRH66235	ProteinID:KRH66235.1
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51735	UniParc:UPI0002949AEE	UniProt:I1JMB3	MapMan:35.1

Description

hypothetical protein

Coordinates

chr3:+:27347485..27356544

Molecular Weight (calculated)

38902.5 Da

IEP (calculated)

7.701

GRAVY (calculated)

-0.175

Length

354 amino acids

Sequence
(BLAST)

001: MTLELFCGIV RVVLCCVSSF MASSTTPTLP LAFPQRHHSV SHRQVLFFAK FSNKVSLSSS VASKRSCKSK CFYAKVQNAL NEEAVETQSS ELEEDTQSTP
101: SSSKLVLVVG GSGGVGQLVV ASLLQQNIKS RLILRNPEKA TELFGEQDKE KLQVFKGDTR KQEDLDPSIF EGVTHVICCT GTTAFPSRRW DDDNTPERVD
201: WVGLKNLVSA LPSSVKRVVL VSSIGVTKFN ELPWSIMNLF GVLKYKKMGE DFLRNSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGQRR AVLIGQGDKL
301: VGEASRIVVA EACVQALDLE VTENQVYEVN SVEGEGPGNE AKKWQELFEA ANSR

Best Arabidopsis Sequence Match ( AT4G31530.1 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.