CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24514	Soybean	plastid	64.95	30.0
KRH24515	Soybean	plastid	80.93	29.73
KRH29518	Soybean	vacuole	81.96	28.55
Zm00001d007921_P001	Maize	plastid	35.05	21.59
VIT_03s0063g02020.t01	Wine grape	plastid	53.61	19.66
EER97808	Sorghum	plastid	37.63	18.48
Os10t0100300-01	Rice	nucleus, plastid	38.66	15.09
GSMUA_Achr8P04880_001	Banana	endoplasmic reticulum, vacuole	39.18	15.05
AT3G18890.1	Thale cress	plastid	44.85	13.57
PGSC0003DMT400021326	Potato	cytosol, peroxisome, plastid	47.42	13.47
CDX99298	Canola	plastid	43.3	13.1
TraesCS5D01G277900.1	Wheat	plastid	37.11	12.83
KRH42344	Soybean	plastid	19.07	12.76
KRH58466	Soybean	plastid	19.07	12.67
CDX92286	Canola	plastid	41.75	12.62
Bra022369.1-P	Field mustard	plastid	41.24	12.44
Solyc10g051110.1.1	Tomato	plastid	46.91	12.4
TraesCS5B01G270200.1	Wheat	plastid	36.08	12.32
TraesCS5A01G269800.1	Wheat	cytosol, extracellular, plastid	36.08	10.82
KRH07338	Soybean	plastid	18.04	10.51
HORVU5Hr1G074000.3	Barley	mitochondrion	35.57	10.07
KRH66235	Soybean	plastid	17.53	9.6
KRG99976	Soybean	nucleus	10.82	8.24
KRH49116	Soybean	nucleus	12.89	7.55

Protein Annotations

EMBL:ACUP02006805	EnsemblPlants:KRH29515	EnsemblPlantsGene:GLYMA_11G121000	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR14194	PANTHER:PTHR14194:SF83	ProteinID:KRH29515	ProteinID:KRH29515.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI0006ED618C	UniProt:A0A0R0HQM0	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr11:+:9238748..9241027

Molecular Weight (calculated)

20428.3 Da

IEP (calculated)

9.396

GRAVY (calculated)

-0.192

Length

194 amino acids

Sequence
(BLAST)

001: MEAFSVQSLI TVTIPSSLSC REATEKPFAS HVNLSHFTRY PCTSRATKHK IRCTNAQASG STKSSTSTAE GISEKTDSKD DNLVFVAGAT GRVGSRTVSP
101: RIPIVTAGVQ NARRAGALVQ SVKKLKLDGT SASGGGQAVE KLEIVECDLE KPETIGSALG NASTVICSIG ASEKGVFDIT DPFNFQKIIR PPKI

Best Arabidopsis Sequence Match ( AT3G18890.1 )
(BLAST)

001: MEGTCFLRGQ PLTTIPSLPS RKGFLLQRWK TNRIVRFSGF KNHSVSGKSR SFDLSLRASG PIRASSVVTE ASPTNLNSKE EDLVFVAGAT GKVGSRTVRE
101: LLKLGFRVRA GVRSAQRAGS LVQSVKEMKL QNTDEGTQPV EKLEIVECDL EKKDSIQPAL GNASVIICCI GASEKEISDI TGPYRIDYLA TKNLVDAATS
201: AKVNNFILVT SLGTNKFGFP AAILNLFWGV LCWKRKAEEA LIESGLNYAI VRPGGMERPT DAYKETHNLT LALDDTLFGG QVSNLQVAEL LACMAKNPQL
301: SFSKIVEVVA ETTAPLTPIE KLLEKIPSKR PYVPPPKASV ATKEVKPVPT KPVTQEPTAP KEDEAPPKEK NVKPRPLSPY ASYEDLKPPT SPIPNSTTSV
401: SPAKSKEVDA TQVPVEANVV PVPDSTSNVP VVEVKQVEEK KERPLSPYAR YENLKPPSSP SPTASSTRKS DSLSPGPTDS DTDKSSTVAK TVTETAVATS
501: VTETSVATSV PETAVATSVT ETAAPATSKM RPLSPYAIYA DLKPPTSPTP ASTGPKEAAS VEDNSELPGG NNDVLKTVDG NLNTIPPSTP EAVPVVSSAI
601: DTSLASGDNT AQPKPRPLSP YTMYADMKPP TSPLPSPVTN H

Arabidopsis Description

TIC62Protein TIC 62, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0U5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.