Factsheet for Solyc01g008920.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058473	Potato	cytosol	68.1	85.71
Zm00001d038694_P001	Maize	cytosol	25.15	75.93
Zm00001d040326_P001	Maize	plastid	50.92	72.81
Zm00001d046769_P001	Maize	cytosol	39.88	68.06
VIT_06s0009g03780.t01	Wine grape	plastid	69.63	67.56
Bra024000.1-P	Field mustard	plastid	66.87	66.06
CDY68555	Canola	plastid	66.56	65.56
CDY13439	Canola	plastid	66.56	65.36
KRH07338	Soybean	plastid	66.56	65.17
Zm00001d029200_P001	Maize	plastid	66.26	64.09
Zm00001d047463_P001	Maize	plastid	65.95	63.99
EER92259	Sorghum	plastid	65.34	63.2
Os03t0355900-00	Rice	cytosol	3.68	63.16
GSMUA_Achr3P17500_001	Banana	plastid	64.42	62.5
KRH66235	Soybean	plastid	67.48	62.15
TraesCS4D01G166200.1	Wheat	plastid	61.96	61.77
AT4G31530.2	Thale cress	plastid	63.8	61.54
TraesCS4A01G189000.1	Wheat	plastid	61.66	61.47
TraesCS4D01G124000.1	Wheat	plastid	61.66	61.47
TraesCS6B01G093300.1	Wheat	plastid	61.35	60.79
Zm00001d037076_P001	Maize	cytosol	22.09	58.54
HORVU2Hr1G069110.2	Barley	plastid	61.35	56.66
Zm00001d032783_P001	Maize	plastid	46.01	42.73
Solyc09g010930.2.1	Tomato	extracellular	24.23	30.98
Solyc02g070770.2.1	Tomato	plastid	22.7	25.34
Solyc02g070760.2.1	Tomato	plastid	21.78	24.15
Solyc10g051110.1.1	Tomato	plastid	23.01	10.22

Protein Annotations

EnsemblPlants:Solyc01g008920.2.1	EnsemblPlantsGene:Solyc01g008920.2	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF384	PFAM:PF13460	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002763326	UniProt:K4AT88
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:2941572..2947566

Molecular Weight (calculated)

35574.4 Da

IEP (calculated)

8.795

GRAVY (calculated)

-0.159

Length

326 amino acids

Sequence
(BLAST)

001: MASKISVSPF WNLPISTQKT QIFTQFPLLQ HFTSSSRFNS SKLKSISYKS ISLSAAVTEE SQTSPPASSS PVSSSKLVLV VGGSGGVGQI VVASLLNRNV
101: KLRLILRDPE KATTLFGEQD EEKLQVWKGD TRSPTGIDPS VFEGVTHVIC CTGTTAFPSR RWDGDNTPER VDWDGVRNLV SALPKSLKRI VLVSSIGVTK
201: FNELPWSIMN LFGVLKYKKM GEDFVRNSGL PFTIIRAGRL TDGPYTSYDL NTLLQATAGE RRAVLIGQGD KLVGEVSRLV VAEACIQALD IDFTEGQTYE
301: VNSIPGDGPG TDTLKWQELF RASHSN

Best Arabidopsis Sequence Match ( AT4G31530.1 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.