CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024000.1-P	Field mustard	plastid	96.99	97.58
CDY68555	Canola	plastid	96.99	97.28
AT4G31530.2	Thale cress	plastid	81.63	80.18
Zm00001d038694_P001	Maize	cytosol	24.4	75.0
Zm00001d040326_P001	Maize	plastid	48.8	71.05
VIT_06s0009g03780.t01	Wine grape	plastid	71.08	70.24
PGSC0003DMT400058473	Potato	cytosol	53.61	68.73
Solyc01g008920.2.1	Tomato	plastid	65.36	66.56
Zm00001d029200_P001	Maize	plastid	67.47	66.47
GSMUA_Achr3P17500_001	Banana	plastid	67.17	66.37
EER92259	Sorghum	plastid	67.17	66.17
Zm00001d047463_P001	Maize	plastid	66.87	66.07
Zm00001d046769_P001	Maize	cytosol	37.65	65.44
TraesCS4D01G124000.1	Wheat	plastid	63.25	64.22
TraesCS4D01G166200.1	Wheat	plastid	63.25	64.22
TraesCS6B01G093300.1	Wheat	plastid	63.55	64.13
TraesCS4A01G189000.1	Wheat	plastid	62.95	63.91
KRH07338	Soybean	plastid	63.55	63.36
Os03t0355900-00	Rice	cytosol	3.61	63.16
Zm00001d037076_P001	Maize	cytosol	22.89	61.79
KRH66235	Soybean	plastid	65.06	61.02
HORVU2Hr1G069110.2	Barley	plastid	62.35	58.64
Zm00001d032783_P001	Maize	plastid	43.07	40.74
CDY40342	Canola	endoplasmic reticulum, peroxisome, plastid	24.1	31.62
CDY10458	Canola	peroxisome, plastid	23.8	31.23
CDY43675	Canola	plastid	24.4	28.83
CDX91377	Canola	cytosol	21.39	25.36
CDY65254	Canola	plastid	23.8	24.38
CDX93359	Canola	plastid	23.8	24.01
CDX74941	Canola	plastid	15.66	18.06
CDX92286	Canola	plastid	23.19	11.99
CDX99298	Canola	plastid	22.29	11.54

Protein Annotations

EnsemblPlants:CDY13439	EnsemblPlantsGene:GSBRNA2T00077731001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF384	PFAM:PF13460	ProteinID:CDY13439	ProteinID:CDY13439.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI0004EDFA76	UniProt:A0A078FKF7	MapMan:35.2	:	:	:

Description

BnaA03g51570DBnaA03g51570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKF7]

Coordinates

chrLK032035:+:318557..320384

Molecular Weight (calculated)

35578.5 Da

IEP (calculated)

5.549

GRAVY (calculated)

-0.106

Length

332 amino acids

Sequence
(BLAST)

001: MAAILSFAPL SVPSTTYPKP SLRIPLFTSL PLPSSSSSSS SGLTSSFLVR NEASLSPSSS PIQALAEEEA VDDSSPSASS SKLVLVVGGT GGVGQLVVAS
101: LLKRNIKSRL LLRDLEKATK LFGKQDEDSL QVVKGDTRNA EDLDPSMFEG VTHVICCTGT TAFPSQRWSG DNTPDKVDWE GVRNLISALP SSVERVVLVS
201: SVGVTKPNEL PWSIMNLFGV LKFKKMGEDF LRESGLPFTI IRPGRLTDGP YTSYDLNTLL KATAGERRAV VIGQGDKLVG EVSRLVVAEA CIQALEIEFT
301: QGKAYEINSV KGDGPGSDPQ KWRELFKVAE SK

Best Arabidopsis Sequence Match ( AT4G31530.1 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.