CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035672_P001	Maize	peroxisome	34.29	78.05
GSMUA_Achr6P15220_001	Banana	cytosol, peroxisome, plastid	60.71	66.67
Solyc09g010930.2.1	Tomato	extracellular	60.71	66.67
KRG99976	Soybean	nucleus	58.21	63.92
CDY40342	Canola	endoplasmic reticulum, peroxisome, plastid	57.5	63.64
CDY10458	Canola	peroxisome, plastid	57.14	63.24
PGSC0003DMT400022763	Potato	extracellular	62.5	58.72
AT2G37660.1	Thale cress	plastid	66.79	57.54
CDY65254	Canola	plastid	65.36	56.48
TraesCS1D01G030600.1	Wheat	golgi	59.64	55.85
Zm00001d011069_P001	Maize	plastid	59.29	55.7
TraesCS1B01G037100.1	Wheat	plastid	59.64	55.67
TraesCS1A01G030100.1	Wheat	plastid	59.29	55.52
CDX93359	Canola	plastid	64.29	54.71
EES17563	Sorghum	plastid	57.5	53.85
HORVU1Hr1G004430.3	Barley	plastid	59.64	52.68
VIT_08s0007g00530.t01	Wine grape	extracellular, plastid	61.07	51.98
Os05t0110300-01	Rice	extracellular	57.86	51.59
KRH49116	Soybean	nucleus	58.93	49.85
CDX74941	Canola	plastid	36.07	35.07
CDY43675	Canola	plastid	21.79	21.71
CDY68555	Canola	plastid	25.36	21.45
CDY13439	Canola	plastid	25.36	21.39
CDX92286	Canola	plastid	19.64	8.57
CDX99298	Canola	plastid	19.29	8.42

Protein Annotations

EnsemblPlants:CDX91377	EnsemblPlantsGene:GSBRNA2T00152681001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR14194
PANTHER:PTHR14194:SF61	PFAM:PF13460	ProteinID:CDX91377	ProteinID:CDX91377.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI0004EE1905	MapMan:35.1	:	:	:	:

Description

BnaC04g07730D

Coordinates

chrLK031867:-:468800..470492

Molecular Weight (calculated)

31147.4 Da

IEP (calculated)

6.156

GRAVY (calculated)

-0.315

Length

280 amino acids

Sequence
(BLAST)

001: MATTTFFRPL LPPTVTNPEL ELYIHRLSQF LAPHFRLLLR HLSNCARLFW MIGESLTESS KNYSSLFPAP QQLNLSPYSL PVPVEEQVKL CTRKSKEKIG
101: GEDEAVVPQM KPGFDPSKGG RPEFYFDEGA YPEQVDWIGQ KNQIDAAKAA GVKQIVLVGS MGGTNINHPL NNIGNANILV WKRKAEQYLA DSGIPYTIIR
201: AGGLQDKEGD IRELLVGKDD ELLETETRTI ARADVAEVCI QALQLEEARF KALDLASKPE GTGTPTKDFK ALFAQVTTRF

Best Arabidopsis Sequence Match ( AT2G37660.1 )
(BLAST)

001: MAMMTTTTTT FFHPLLPANT YKSGAVASSF VSVPRSSSLQ FRSLVSDSTS ICGPSKFTGK NRRVSVTVSA AATTEPLTVL VTGAGGRTGQ IVYKKLKERS
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF

Arabidopsis Description

Uncharacterized protein At2g37660, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80934]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.