CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011069_P001	Maize	plastid	93.98	94.3
Zm00001d035672_P001	Maize	peroxisome	36.79	89.43
TraesCS1B01G037100.1	Wheat	plastid	84.95	84.67
TraesCS1D01G030600.1	Wheat	golgi	84.28	84.28
TraesCS1A01G030100.1	Wheat	plastid	83.28	83.28
GSMUA_Achr6P15220_001	Banana	cytosol, peroxisome, plastid	70.23	82.35
KRG99976	Soybean	nucleus	67.22	78.82
Os05t0110300-01	Rice	extracellular	81.94	78.03
HORVU1Hr1G004430.3	Barley	plastid	82.27	77.6
KXG37247	Sorghum	plastid	66.56	77.43
Solyc09g010930.2.1	Tomato	extracellular	65.55	76.86
PGSC0003DMT400022763	Potato	extracellular	69.23	69.46
CDY65254	Canola	plastid	74.25	68.52
Bra005175.1-P	Field mustard	plastid	72.91	67.7
Bra017165.1-P	Field mustard	plastid	74.25	67.68
CDX93359	Canola	plastid	73.24	66.57
VIT_08s0007g00530.t01	Wine grape	extracellular, plastid	73.24	66.57
AT2G37660.1	Thale cress	plastid	72.24	66.46
KRH49116	Soybean	nucleus	71.57	64.65
CDX91377	Canola	cytosol	53.85	57.5
CDX74941	Canola	plastid	45.48	47.22
EER92259	Sorghum	plastid	27.09	24.04
EES15131	Sorghum	plastid	22.74	24.03
EER97808	Sorghum	plastid	19.73	14.94

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:8068663	UniProt:C5YYG4	EnsemblPlants:EES17563	ProteinID:EES17563
ProteinID:EES17563.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009605	GO:GO:0009607	GO:GO:0042742
GO:GO:0048046	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13460	PANTHER:PTHR14194	PANTHER:PTHR14194:SF61
EnsemblPlantsGene:SORBI_3009G010900	SUPFAM:SSF51735	UniParc:UPI0001A88C9B	RefSeq:XP_002439133.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:1000401..1003691

Molecular Weight (calculated)

31771.9 Da

IEP (calculated)

7.623

GRAVY (calculated)

-0.224

Length

299 amino acids

Sequence
(BLAST)

001: MATAAACVRV ASPFTGAPLR HPSHVISARR GPRRAGLAVT ATAATGGGSP RTVLVTGAGG RTGQIVYKKL KERAGEFVGR GLVTTEESKG KIGGGDDVFV
101: GDIRDPESIA PAIEGIDALI ILTSAVPKMK PGFDPSKGER PEFYFEEGSY PEQVDWIGQK NQIDAAKSIG AKHIVLVGSM GGTDTNHPLN KLGNANILVW
201: KRKAEQYLAD SGLPYTIIRA GGLQDKDGGL RELIVGKDDE ILKTETRTIA RADVAEVCIQ ALLFEEAKFK AFDLASKPEG EGTPTTDFRA IFAQVDSHF

Best Arabidopsis Sequence Match ( AT2G37660.1 )
(BLAST)

001: MAMMTTTTTT FFHPLLPANT YKSGAVASSF VSVPRSSSLQ FRSLVSDSTS ICGPSKFTGK NRRVSVTVSA AATTEPLTVL VTGAGGRTGQ IVYKKLKERS
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF

Arabidopsis Description

Uncharacterized protein At2g37660, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80934]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.