CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005175.1-P	Field mustard	plastid	75.0	67.08
CDX93359	Canola	plastid	66.32	58.05
CDY65254	Canola	plastid	65.28	58.02
AT2G37660.1	Thale cress	plastid	64.93	57.54
CDY40342	Canola	endoplasmic reticulum, peroxisome, plastid	46.53	52.96
GSMUA_Achr6P15220_001	Banana	cytosol, peroxisome, plastid	46.53	52.55
CDY10458	Canola	peroxisome, plastid	45.83	52.17
Solyc09g010930.2.1	Tomato	extracellular	44.1	49.8
KRG99976	Soybean	nucleus	43.4	49.02
Zm00001d011069_P001	Maize	plastid	49.31	47.65
PGSC0003DMT400022763	Potato	extracellular	48.26	46.64
TraesCS1D01G030600.1	Wheat	golgi	48.26	46.49
TraesCS1B01G037100.1	Wheat	plastid	48.26	46.33
EES17563	Sorghum	plastid	47.22	45.48
TraesCS1A01G030100.1	Wheat	plastid	46.88	45.15
VIT_08s0007g00530.t01	Wine grape	extracellular, plastid	48.96	42.86
HORVU1Hr1G004430.3	Barley	plastid	46.88	42.59
KRH49116	Soybean	nucleus	48.61	42.3
Os05t0110300-01	Rice	extracellular	45.83	42.04
CDX91377	Canola	cytosol	35.07	36.07
Zm00001d035672_P001	Maize	peroxisome	8.33	19.51
CDY43675	Canola	plastid	16.32	16.73
CDY68555	Canola	plastid	18.06	15.71
CDY13439	Canola	plastid	18.06	15.66
CDX92286	Canola	plastid	17.01	7.63
CDX99298	Canola	plastid	16.67	7.49

Protein Annotations

EnsemblPlants:CDX74941	EnsemblPlantsGene:GSBRNA2T00116947001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR14194
PANTHER:PTHR14194:SF61	PFAM:PF13460	ProteinID:CDX74941	ProteinID:CDX74941.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI0004EE940A	MapMan:35.1	:	:	:	:

Description

BnaA05g06870D

Coordinates

chrLK031802:+:1571854..1574001

Molecular Weight (calculated)

31953.3 Da

IEP (calculated)

10.131

GRAVY (calculated)

-0.336

Length

288 amino acids

Sequence
(BLAST)

001: MAATTTFFRP LLPSNSYKSR AVVDSPFVSV PRSSIPYSSP SLQLRSLVSD HRRKSNGKLR RVSDIVSSAA TTEPLTVLVT GAGGRTGQIV YKKLKERSDE
101: FVARGLVRTK ESKEKIGGED EVFIGDIRDP SAIAPAVQGI DALVILTSAV PQMKPGFDPS KGGRPEFYFD EGAYPEQVDW IGQKNQIDAA KAAGVKQIYW
201: QCQHSGLEEE SRAVLELIPV FHTPSSGRVV CRTRKVAFES YLSEKMTSFL RLKQEQLQEL MLQKSVFRRT GTPTTDFKAL FAQVTTRF

Best Arabidopsis Sequence Match ( AT2G37660.1 )
(BLAST)

001: MAMMTTTTTT FFHPLLPANT YKSGAVASSF VSVPRSSSLQ FRSLVSDSTS ICGPSKFTGK NRRVSVTVSA AATTEPLTVL VTGAGGRTGQ IVYKKLKERS
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF

Arabidopsis Description

Uncharacterized protein At2g37660, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80934]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.