Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 2
- peroxisome 1
- mitochondrion 1
- endoplasmic reticulum 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009604.1-P | Field mustard | endoplasmic reticulum, peroxisome, plastid | 99.21 | 99.21 |
| CDY10458 | Canola | peroxisome, plastid | 98.02 | 98.02 |
| AT5G02240.1 | Thale cress | endoplasmic reticulum, peroxisome, plastid | 92.49 | 92.49 |
| CDY65254 | Canola | plastid | 80.63 | 62.96 |
| CDX93359 | Canola | plastid | 80.63 | 62.01 |
| CDX91377 | Canola | cytosol | 63.64 | 57.5 |
| CDX74941 | Canola | plastid | 52.96 | 46.53 |
| CDY68555 | Canola | plastid | 31.62 | 24.17 |
| CDY13439 | Canola | plastid | 31.62 | 24.1 |
| CDY43675 | Canola | plastid | 26.09 | 23.49 |
| CDX99298 | Canola | plastid | 24.9 | 9.83 |
| CDX92286 | Canola | plastid | 24.9 | 9.81 |
Protein Annotations
| EnsemblPlants:CDY40342 | EnsemblPlantsGene:GSBRNA2T00069528001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR14194 |
| PANTHER:PTHR14194:SF61 | PFAM:PF13460 | ProteinID:CDY40342 | ProteinID:CDY40342.1 | SUPFAM:SSF51735 | UniParc:UPI0004EEC695 |
| UniProt:A0A078HR75 | MapMan:35.1 | : | : | : | : |
Description
BnaA10g27260DBnaA10g27260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR75]
Coordinates
chrLK032468:+:187945..189508
Molecular Weight (calculated)
27190.6 Da
IEP (calculated)
5.918
GRAVY (calculated)
-0.321
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLPTVIVT GASGRTGQIV YKKLKERSDK FVAKGLVRTP EGKEKIGGED DVFIGDIRDA ESITPAIQGI DALVILTSAV PKMKPGFDPT KGGRPEFIFD
101: DGQYPEQVDW IGQKNQIDAA KAAGVKHIVL VGSMGGTNPD HPLNKLGNGN ILIWKRKAEQ YLADSGTPYT IIRAGGLLDK EGGARELLVG KDDELLQTDT
201: KTVPRADVAE VCIQALLLEE AKNKAFDLGS KPEGTSSPTN DFKALFSQVT ARF
101: DGQYPEQVDW IGQKNQIDAA KAAGVKHIVL VGSMGGTNPD HPLNKLGNGN ILIWKRKAEQ YLADSGTPYT IIRAGGLLDK EGGARELLVG KDDELLQTDT
201: KTVPRADVAE VCIQALLLEE AKNKAFDLGS KPEGTSSPTN DFKALFSQVT ARF
001: MANLPTVLVT GASGRTGQIV YKKLKEGSDK FVAKGLVRSA QGKEKIGGEA DVFIGDITDA DSINPAFQGI DALVILTSAV PKMKPGFDPT KGGRPEFIFE
101: DGQYPEQVDW IGQKNQIDAA KVAGVKHIVV VGSMGGTNPD HPLNKLGNGN ILVWKRKAEQ YLADSGTPYT IIRAGGLLDK EGGVRELLVG KDDELLQTDT
201: KTVPRADVAE VCIQALLFEE AKNKAFDLGS KPEGTSTPTK DFKALFSQVT SRF
101: DGQYPEQVDW IGQKNQIDAA KVAGVKHIVV VGSMGGTNPD HPLNKLGNGN ILVWKRKAEQ YLADSGTPYT IIRAGGLLDK EGGVRELLVG KDDELLQTDT
201: KTVPRADVAE VCIQALLFEE AKNKAFDLGS KPEGTSTPTK DFKALFSQVT SRF
Arabidopsis Description
Uncharacterized protein At5g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG6]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.