CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017165.1-P	Field mustard	plastid	98.77	97.56
CDX93359	Canola	plastid	97.22	95.74
AT2G37660.1	Thale cress	plastid	87.35	87.08
GSMUA_Achr6P15220_001	Banana	cytosol, peroxisome, plastid	66.67	84.71
Solyc09g010930.2.1	Tomato	extracellular	64.2	81.57
CDY40342	Canola	endoplasmic reticulum, peroxisome, plastid	62.96	80.63
KRG99976	Soybean	nucleus	62.65	79.61
CDY10458	Canola	peroxisome, plastid	62.04	79.45
Zm00001d035672_P001	Maize	peroxisome	29.63	78.05
Zm00001d011069_P001	Maize	plastid	69.75	75.84
EES17563	Sorghum	plastid	68.52	74.25
PGSC0003DMT400022763	Potato	extracellular	67.59	73.49
TraesCS1B01G037100.1	Wheat	plastid	67.9	73.33
TraesCS1D01G030600.1	Wheat	golgi	67.59	73.24
TraesCS1A01G030100.1	Wheat	plastid	66.36	71.91
Os05t0110300-01	Rice	extracellular	66.05	68.15
HORVU1Hr1G004430.3	Barley	plastid	66.05	67.51
VIT_08s0007g00530.t01	Wine grape	extracellular, plastid	67.9	66.87
KRH49116	Soybean	nucleus	66.98	65.56
CDX91377	Canola	cytosol	56.48	65.36
CDX74941	Canola	plastid	58.02	65.28
CDY43675	Canola	plastid	22.84	26.33
CDY68555	Canola	plastid	24.38	23.87
CDY13439	Canola	plastid	24.38	23.8
CDX92286	Canola	plastid	20.06	10.12
CDX99298	Canola	plastid	19.75	9.98

Protein Annotations

EnsemblPlants:CDY65254	EnsemblPlantsGene:GSBRNA2T00045473001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR14194
PANTHER:PTHR14194:SF61	PFAM:PF13460	ProteinID:CDY65254	ProteinID:CDY65254.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI0004EDFC87	UniProt:A0A078JF18	MapMan:35.1	:	:	:

Description

BnaA04g29010DBnaA04g29010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JF18]

Coordinates

chrLK034707:+:504..2370

Molecular Weight (calculated)

34857.8 Da

IEP (calculated)

8.867

GRAVY (calculated)

-0.176

Length

324 amino acids

Sequence
(BLAST)

001: MAMTTTTLFH ALVPSTTYKP GAVSSSFVSV PSSSPSLQFR SLVSDTTSIY GRRKFTGNLR RVSLTVSAAA AAEPLTVLVT GAGGRTGQIV YKKLKERSDQ
101: FVARGLVRTK ESKEKIGGED EVFVGDIRDP EAIAPAVQGI DALVILTSAV PKMKPGFDPS KGERPEFYFE EGAYPEQVDW IGQKNQIDAA KAAGVKQIVL
201: VGSMGGTNIN NPLNSIGNAN ILVWKRKAEQ YLADSGIPYT IIRAGGLQDK EGGIRELIVG KDDEILETEM RTIARADVAE VCVQQALQLE EAKFKALDLA
301: SKPEGTGTPT KDFKALFAQV TARF

Best Arabidopsis Sequence Match ( AT2G37660.1 )
(BLAST)

001: MAMMTTTTTT FFHPLLPANT YKSGAVASSF VSVPRSSSLQ FRSLVSDSTS ICGPSKFTGK NRRVSVTVSA AATTEPLTVL VTGAGGRTGQ IVYKKLKERS
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF

Arabidopsis Description

Uncharacterized protein At2g37660, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80934]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.