CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	golgi, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EES00126
EES12950
OQU77594

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34460.1	EES12950	AT1G14340.1	21798944
AT2G34460.1	EES00126	AT1G55190.1	21798944
AT2G34460.1	OQU77594	AT1G55190.1	21798944
AT2G34460.1	EES00126	AT3G13720.1	21798944
AT2G34460.1	OQU77594	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031799_P001	Maize	plastid	97.53	97.53
TraesCS7D01G346000.1	Wheat	plastid	83.39	82.81
TraesCS7A01G338800.1	Wheat	mitochondrion, plastid	83.39	82.81
HORVU7Hr1G083360.1	Barley	mitochondrion, plastid	81.98	81.4
TraesCS7B01G250100.1	Wheat	mitochondrion, plastid	81.63	81.05
Os06t0360300-01	Rice	plastid	80.57	78.35
VIT_10s0003g03090.t01	Wine grape	cytosol	60.07	68.0
AT2G34460.1	Thale cress	plastid	62.9	63.57
KRH42344	Soybean	plastid	62.54	61.03
CDY43675	Canola	plastid	60.42	60.85
KRH58466	Soybean	plastid	61.48	59.59
Bra021912.1-P	Field mustard	plastid	60.42	59.17
Solyc02g070770.2.1	Tomato	plastid	60.78	58.9
PGSC0003DMT400021415	Potato	plastid	59.36	57.53
Solyc02g070760.2.1	Tomato	plastid	56.89	54.76
GSMUA_Achr4P31210_001	Banana	plastid	28.62	46.02
KXG37247	Sorghum	plastid	25.09	27.63
EER92259	Sorghum	plastid	29.68	24.93
EER97808	Sorghum	plastid	34.63	24.81
EES17563	Sorghum	plastid	24.03	22.74

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:8083545	UniProt:C5YMB7	EnsemblPlants:EES15131	ProteinID:EES15131
ProteinID:EES15131.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507
GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009941	GO:GO:0010287
GO:GO:0016020	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13460	PANTHER:PTHR15020	PANTHER:PTHR15020:SF11
EnsemblPlantsGene:SORBI_3007G157300	SUPFAM:SSF51735	unigene:Sbi.11145	UniParc:UPI0001A87CEA	RefSeq:XP_002445636.1	:

Description

hypothetical protein

Coordinates

chr7:-:59151663..59154784

Molecular Weight (calculated)

30076.3 Da

IEP (calculated)

9.473

GRAVY (calculated)

0.051

Length

283 amino acids

Sequence
(BLAST)

001: MASAVCGVTA RPHLPSAVPA AARKLFFRCR AASTMNEASA SSPDAEEKKT TTVFVAGSTG RTGKRVVEKL LAKGFGVVAG TTDVSRARGS LPQDPNLQLV
101: RADVTEGVDK LVEAVRGVDA VVCATGFRRS FDPFAPWKVD NFGTVNLVEA CRKAGVTRFV LVSSILVNGA AMGQFLNPAY IVLNLLGLTL VAKLQAENHI
201: RKSGINYTIV RPGGLTDQPP TGNIVMEPED TLYSGSISRS QVAEVAVEAL LCPESSYKVV EIIARTDAPN RPLKDMYAAI KQN

Best Arabidopsis Sequence Match ( AT2G34460.1 )
(BLAST)

001: MATSLLLRHS SAVFFSQSSF FTKNKSFRSF TSIKMEKGEA ENAVKTKKVF VAGATGQTGK RIVEQLLSRG FAVKAGVRDV EKAKTSFKDD PSLQIVRADV
101: TEGPDKLAEV IGDDSQAVIC ATGFRPGFDI FTPWKVDNFG TVNLVDACRK QGVEKFVLVS SILVNGAAMG QILNPAYLFL NLFGLTLVAK LQAEKYIKKS
201: GINYTIVRPG GLKNDPPTGN VVMEPEDTLY EGSISRDLVA EVAVEALLQE ESSFKVVEIV ARAEAPKRSY KDLFASVKGQ

Arabidopsis Description

Uncharacterized protein At2g34460, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H124]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.