Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43675 | Canola | plastid | 82.5 | 82.21 |
| Bra021912.1-P | Field mustard | plastid | 83.57 | 80.97 |
| VIT_10s0003g03090.t01 | Wine grape | cytosol | 66.07 | 74.0 |
| KRH42344 | Soybean | plastid | 71.07 | 68.62 |
| KRH58466 | Soybean | plastid | 71.43 | 68.49 |
| TraesCS7D01G346000.1 | Wheat | plastid | 65.36 | 64.21 |
| TraesCS7B01G250100.1 | Wheat | mitochondrion, plastid | 65.0 | 63.86 |
| TraesCS7A01G338800.1 | Wheat | mitochondrion, plastid | 64.64 | 63.51 |
| HORVU7Hr1G083360.1 | Barley | mitochondrion, plastid | 64.64 | 63.51 |
| EES15131 | Sorghum | plastid | 63.57 | 62.9 |
| Solyc02g070770.2.1 | Tomato | plastid | 65.36 | 62.67 |
| Zm00001d031799_P001 | Maize | plastid | 63.21 | 62.54 |
| Os06t0360300-01 | Rice | plastid | 65.0 | 62.54 |
| PGSC0003DMT400021415 | Potato | plastid | 63.93 | 61.3 |
| Solyc02g070760.2.1 | Tomato | plastid | 63.93 | 60.88 |
| GSMUA_Achr4P31210_001 | Banana | plastid | 28.57 | 45.45 |
| AT5G02240.1 | Thale cress | endoplasmic reticulum, peroxisome, plastid | 23.93 | 26.48 |
| AT4G31530.2 | Thale cress | plastid | 29.64 | 24.56 |
| AT2G37660.1 | Thale cress | plastid | 27.5 | 23.69 |
| AT3G18890.1 | Thale cress | plastid | 33.21 | 14.51 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:818009 | UniProt:A0A178VQL0 | ProteinID:AAC26697.2 | ProteinID:AAM14955.1 |
| ProteinID:AEC08977.1 | ArrayExpress:AT2G34460 | EnsemblPlantsGene:AT2G34460 | RefSeq:AT2G34460 | TAIR:AT2G34460 | RefSeq:AT2G34460-TAIR-G |
| EnsemblPlants:AT2G34460.1 | TAIR:AT2G34460.1 | EMBL:AY034977 | EMBL:AY056425 | Unigene:At.48549 | EMBL:BT000884 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009534 |
| GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009941 | GO:GO:0010287 | GO:GO:0016020 |
| InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_565789.2 | ProteinID:OAP08048.1 | PFAM:PF13460 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR15020 | PANTHER:PTHR15020:SF11 |
| UniProt:Q8H124 | SUPFAM:SSF51735 | UniParc:UPI00000ADB07 | SEG:seg | : | : |
Description
Uncharacterized protein At2g34460, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H124]
Coordinates
chr2:+:14529558..14530958
Molecular Weight (calculated)
30472.7 Da
IEP (calculated)
9.517
GRAVY (calculated)
-0.053
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSLLLRHS SAVFFSQSSF FTKNKSFRSF TSIKMEKGEA ENAVKTKKVF VAGATGQTGK RIVEQLLSRG FAVKAGVRDV EKAKTSFKDD PSLQIVRADV
101: TEGPDKLAEV IGDDSQAVIC ATGFRPGFDI FTPWKVDNFG TVNLVDACRK QGVEKFVLVS SILVNGAAMG QILNPAYLFL NLFGLTLVAK LQAEKYIKKS
201: GINYTIVRPG GLKNDPPTGN VVMEPEDTLY EGSISRDLVA EVAVEALLQE ESSFKVVEIV ARAEAPKRSY KDLFASVKGQ
101: TEGPDKLAEV IGDDSQAVIC ATGFRPGFDI FTPWKVDNFG TVNLVDACRK QGVEKFVLVS SILVNGAAMG QILNPAYLFL NLFGLTLVAK LQAEKYIKKS
201: GINYTIVRPG GLKNDPPTGN VVMEPEDTLY EGSISRDLVA EVAVEALLQE ESSFKVVEIV ARAEAPKRSY KDLFASVKGQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.