Factsheet for Os06t0360300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0196500-01
Os04t0641400-02
Os05t0200280-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34460.1	Os04t0641400-02	AT1G14340.1	21798944
AT2G34460.1	Os01t0196500-01	AT1G55190.1	21798944
AT2G34460.1	Os05t0200280-01	AT1G55190.1	21798944
AT2G34460.1	Os01t0196500-01	AT3G13720.1	21798944
AT2G34460.1	Os05t0200280-01	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G338800.1	Wheat	mitochondrion, plastid	83.51	85.26
HORVU7Hr1G083360.1	Barley	mitochondrion, plastid	82.82	84.56
TraesCS7D01G346000.1	Wheat	plastid	82.82	84.56
TraesCS7B01G250100.1	Wheat	mitochondrion, plastid	82.47	84.21
EES15131	Sorghum	plastid	78.35	80.57
Zm00001d031799_P001	Maize	plastid	76.63	78.8
VIT_10s0003g03090.t01	Wine grape	cytosol	57.39	66.8
AT2G34460.1	Thale cress	plastid	62.54	65.0
CDY43675	Canola	plastid	59.79	61.92
KRH42344	Soybean	plastid	60.48	60.69
Bra021912.1-P	Field mustard	plastid	59.79	60.21
KRH58466	Soybean	plastid	59.79	59.59
Solyc02g070770.2.1	Tomato	plastid	58.76	58.56
PGSC0003DMT400021415	Potato	plastid	57.04	56.85
Solyc02g070760.2.1	Tomato	plastid	55.33	54.76
GSMUA_Achr4P31210_001	Banana	plastid	28.18	46.59
Os03t0822200-01	Rice	extracellular, plasma membrane	24.05	27.24
Os05t0110300-01	Rice	extracellular	25.43	23.57
Os03t0355900-00	Rice	cytosol	1.37	21.05
Os10t0100300-01	Rice	nucleus, plastid	32.65	19.11

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:4340998	EMBL:AK105919	ProteinID:BAD35935.1	ProteinID:BAD35960.1
ProteinID:BAF19517.1	ProteinID:BAS97700.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009941
GO:GO:0010287	GO:GO:0016020	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os06g0360300	EnsemblPlants:Os06t0360300-01
PFAM:PF13460	PANTHER:PTHR15020	PANTHER:PTHR15020:SF11	UniProt:Q69SX2	SUPFAM:SSF51735	UniParc:UPI000040391F
RefSeq:XP_015641023.1	SEG:seg	:	:	:	:

Description

NAD(P)-binding domain containing protein. (Os06t0360300-01);Similar to 3-beta hydroxysteroid dehydrogenase/isomerase. (Os06t0360300-02)

Coordinates

chr6:-:14880277..14892856

Molecular Weight (calculated)

31109.6 Da

IEP (calculated)

9.749

GRAVY (calculated)

0.039

Length

291 amino acids

Sequence
(BLAST)

001: MATAFHTIAA ARPRLPLAAF ACLCPGPRPA TRKLSLTSTA VSTIDSAPAS SSDAKKTTTV FVAGSTGRTG KRVVEKLLER GFGVVAGTTD VGRARRSLPQ
101: DPNLQLVRAD VMEGTDKLVD AIRGADAVVC ATGFRRSFDP FAPWKVDNFG TVNLVEACRK AGVTRFILVS SILVNGAAMG QLLNPAYTVL NLFGLVLVAK
201: LQAEKHIRSS GINYTIIRPG GLTEQPPTGN IVMEPEDTLY EGSISRQQVA EVAVEALLCR EESSYKVVEI VTRAEAHNRP LKDLFASIKQ S

Best Arabidopsis Sequence Match ( AT2G34460.1 )
(BLAST)

001: MATSLLLRHS SAVFFSQSSF FTKNKSFRSF TSIKMEKGEA ENAVKTKKVF VAGATGQTGK RIVEQLLSRG FAVKAGVRDV EKAKTSFKDD PSLQIVRADV
101: TEGPDKLAEV IGDDSQAVIC ATGFRPGFDI FTPWKVDNFG TVNLVDACRK QGVEKFVLVS SILVNGAAMG QILNPAYLFL NLFGLTLVAK LQAEKYIKKS
201: GINYTIVRPG GLKNDPPTGN VVMEPEDTLY EGSISRDLVA EVAVEALLQE ESSFKVVEIV ARAEAPKRSY KDLFASVKGQ

Arabidopsis Description

Uncharacterized protein At2g34460, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H124]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.