Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G346000.1 | Wheat | plastid | 96.84 | 96.84 |
| HORVU7Hr1G083360.1 | Barley | mitochondrion, plastid | 96.49 | 96.49 |
| TraesCS7A01G338800.1 | Wheat | mitochondrion, plastid | 95.79 | 95.79 |
| Os06t0360300-01 | Rice | plastid | 84.21 | 82.47 |
| EES15131 | Sorghum | plastid | 81.05 | 81.63 |
| Zm00001d031799_P001 | Maize | plastid | 79.65 | 80.21 |
| VIT_10s0003g03090.t01 | Wine grape | cytosol | 59.65 | 68.0 |
| AT2G34460.1 | Thale cress | plastid | 63.86 | 65.0 |
| CDY43675 | Canola | plastid | 61.75 | 62.63 |
| Bra021912.1-P | Field mustard | plastid | 61.75 | 60.9 |
| KRH42344 | Soybean | plastid | 61.4 | 60.34 |
| KRH58466 | Soybean | plastid | 61.05 | 59.59 |
| Solyc02g070770.2.1 | Tomato | plastid | 59.65 | 58.22 |
| PGSC0003DMT400021415 | Potato | plastid | 58.25 | 56.85 |
| Solyc02g070760.2.1 | Tomato | plastid | 56.14 | 54.42 |
| GSMUA_Achr4P31210_001 | Banana | plastid | 27.72 | 44.89 |
| TraesCS6B01G093300.1 | Wheat | plastid | 28.42 | 24.62 |
| TraesCS5B01G494600.1 | Wheat | plastid | 24.21 | 23.79 |
| TraesCS1B01G037100.1 | Wheat | plastid | 24.56 | 23.33 |
| TraesCS5B01G270200.1 | Wheat | plastid | 35.44 | 17.78 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0009507 | GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009941 |
| GO:GO:0010287 | GO:GO:0016020 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13460 | PANTHER:PTHR15020 |
| PANTHER:PTHR15020:SF11 | SUPFAM:SSF51735 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7B01G250100 | EnsemblPlants:TraesCS7B01G250100.1 | TIGR:cd05243 |
Description
No Description!
Coordinates
chr7B:-:461246264..461247482
Molecular Weight (calculated)
30162.7 Da
IEP (calculated)
9.440
GRAVY (calculated)
0.135
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVFHATTA RPRLPLVLAC LSPTTRKLHV TRPAALSMDE ASASAPGAKK TTTVFVAGST GKTGKRVVAK LLERGFGVVA GTTDVGRARG SLPQDPNLQL
101: VRADVTEGAD KLVEAVRGVD AVVCATGFRR SFDPFAPWKV DNLGTVNLVE ACRKAGVTRF ILVSSILVNG AAMGQLLNPA YIVLNLFGLV LVAKLQAEKY
201: IRGSGINYTI VRPGGLTEQP PTGNIVMEPE DTLYEGSISR DQVAEVAVEA LLCPEESSYK VVEIVTGADA PSRLLKDMFA SVKQK
101: VRADVTEGAD KLVEAVRGVD AVVCATGFRR SFDPFAPWKV DNLGTVNLVE ACRKAGVTRF ILVSSILVNG AAMGQLLNPA YIVLNLFGLV LVAKLQAEKY
201: IRGSGINYTI VRPGGLTEQP PTGNIVMEPE DTLYEGSISR DQVAEVAVEA LLCPEESSYK VVEIVTGADA PSRLLKDMFA SVKQK
001: MATSLLLRHS SAVFFSQSSF FTKNKSFRSF TSIKMEKGEA ENAVKTKKVF VAGATGQTGK RIVEQLLSRG FAVKAGVRDV EKAKTSFKDD PSLQIVRADV
101: TEGPDKLAEV IGDDSQAVIC ATGFRPGFDI FTPWKVDNFG TVNLVDACRK QGVEKFVLVS SILVNGAAMG QILNPAYLFL NLFGLTLVAK LQAEKYIKKS
201: GINYTIVRPG GLKNDPPTGN VVMEPEDTLY EGSISRDLVA EVAVEALLQE ESSFKVVEIV ARAEAPKRSY KDLFASVKGQ
101: TEGPDKLAEV IGDDSQAVIC ATGFRPGFDI FTPWKVDNFG TVNLVDACRK QGVEKFVLVS SILVNGAAMG QILNPAYLFL NLFGLTLVAK LQAEKYIKKS
201: GINYTIVRPG GLKNDPPTGN VVMEPEDTLY EGSISRDLVA EVAVEALLQE ESSFKVVEIV ARAEAPKRSY KDLFASVKGQ
Arabidopsis Description
Uncharacterized protein At2g34460, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H124]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.