Factsheet for HORVU7Hr1G083360.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	golgi, plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G028520.1
HORVU2Hr1G115210.1
HORVU3Hr1G018940.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34460.1	HORVU2Hr1G115210.1	AT1G14340.1	21798944
AT2G34460.1	HORVU1Hr1G028520.1	AT1G55190.1	21798944
AT2G34460.1	HORVU3Hr1G018940.2	AT1G55190.1	21798944
AT2G34460.1	HORVU1Hr1G028520.1	AT3G13720.1	21798944
AT2G34460.1	HORVU3Hr1G018940.2	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G346000.1	Wheat	plastid	96.84	96.84
TraesCS7B01G250100.1	Wheat	mitochondrion, plastid	96.49	96.49
TraesCS7A01G338800.1	Wheat	mitochondrion, plastid	96.14	96.14
Os06t0360300-01	Rice	plastid	84.56	82.82
EES15131	Sorghum	plastid	81.4	81.98
Zm00001d031799_P001	Maize	plastid	79.65	80.21
VIT_10s0003g03090.t01	Wine grape	cytosol	59.3	67.6
AT2G34460.1	Thale cress	plastid	63.51	64.64
CDY43675	Canola	plastid	61.4	62.28
Bra021912.1-P	Field mustard	plastid	61.4	60.55
KRH42344	Soybean	plastid	61.4	60.34
KRH58466	Soybean	plastid	61.05	59.59
Solyc02g070770.2.1	Tomato	plastid	60.0	58.56
PGSC0003DMT400021415	Potato	plastid	58.25	56.85
Solyc02g070760.2.1	Tomato	plastid	56.49	54.76
GSMUA_Achr4P31210_001	Banana	plastid	27.72	44.89
HORVU2Hr1G069110.2	Barley	plastid	28.42	22.95
HORVU1Hr1G004430.3	Barley	plastid	24.21	21.77
HORVU5Hr1G074000.3	Barley	mitochondrion	35.44	14.74

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009941
GO:GO:0010287	GO:GO:0016020	EnsemblPlantsGene:HORVU7Hr1G083360	EnsemblPlants:HORVU7Hr1G083360.1	UniProt:M0YWB2	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13460	PANTHER:PTHR15020	PANTHER:PTHR15020:SF11	SUPFAM:SSF51735	UniParc:UPI0002955EDA

Description

No Description!

Coordinates

chrchr7H:+:502090949..502092564

Molecular Weight (calculated)

30328.9 Da

IEP (calculated)

9.829

GRAVY (calculated)

0.081

Length

285 amino acids

Sequence
(BLAST)

001: MAGVFHATTA RPRLPLVLAC LSPTTRKLHV TRPAATTMDE ASASAPGAKK TTTVFVAGST GKTGKRVVAK LLERGFGVVA GTTDVGRARA SLPQDPNLQL
101: VRADVTEGAD KLVEAVRGVD AVVCATGFRR SFDPFAPWKV DNLGTVNLVE ACRKAGVTRF VLVSSILVNG AAMGQLLNPA YIVLNLFGLV LVAKLQAEKY
201: IRGSGINYTI VRPGGLTEQP PIGNIVMEPE DTLYEGSISR DQVAEVTVEA LLCPEESSYK VVEIVTRADA PSRPLKDRFA SIKQK

Best Arabidopsis Sequence Match ( AT2G34460.1 )
(BLAST)

001: MATSLLLRHS SAVFFSQSSF FTKNKSFRSF TSIKMEKGEA ENAVKTKKVF VAGATGQTGK RIVEQLLSRG FAVKAGVRDV EKAKTSFKDD PSLQIVRADV
101: TEGPDKLAEV IGDDSQAVIC ATGFRPGFDI FTPWKVDNFG TVNLVDACRK QGVEKFVLVS SILVNGAAMG QILNPAYLFL NLFGLTLVAK LQAEKYIKKS
201: GINYTIVRPG GLKNDPPTGN VVMEPEDTLY EGSISRDLVA EVAVEALLQE ESSFKVVEIV ARAEAPKRSY KDLFASVKGQ

Arabidopsis Description

Uncharacterized protein At2g34460, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H124]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.